RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 TNRC18O15417 2968 aaPredicted RBP10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
TNRC6B-208ENST00000489500 SIN3BO75182 1162 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 XRCC5P13010 732 aaKnown RBP10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 ADD2P35612 726 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 CHRNA4P43681 627 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 ERVK-24P63145 666 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 UBE3CQ15386 1083 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 ZYXQ15942 572 aaKnown RBP10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 TMEM179Q6ZVK1 233 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 RAB44Q7Z6P3 723 aaPredicted RBP10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 PLEKHH3Q7Z736 793 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 SUSD3Q96L08 255 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 DEFB118Q96PH6 123 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 PLVAPQ9BX97 442 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 ZNF287Q9HBT7 754 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 BRD7Q9NPI1 651 aa10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 RBM19Q9Y4C8 960 aaKnown RBP10.59□□□□□ -0.71
TNRC6B-208ENST00000489500 RPTORQ8N122 1335 aa10.58□□□□□ -0.71
TNRC6B-208ENST00000489500 ERC2O15083 957 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 LGR5O75473 907 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 MBD4O95243 580 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 FURINP09958 794 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 CYP2B6P20813 491 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 PLCD1P51178 756 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 SPEM2Q0P670 501 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 CATSPERGQ6ZRH7 1159 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 NECAB2Q7Z6G3 386 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 SIRT2Q8IXJ6 389 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 SCG3Q8WXD2 468 aaKnown RBP10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 ARMT1Q9H993 441 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 DCP1AQ9NPI6 582 aaPredicted RBP10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 ECHDC1Q9NTX5 307 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 SLC5A4Q9NY91 659 aa10.58□□□□□ -0.72
TNRC6B-208ENST00000489500 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 VCAM1P19320 739 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 ALAS2P22557 587 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 SHMT1P34896 483 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 COG2Q14746 738 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 HABP4Q5JVS0 413 aaKnown RBP10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 MFSD14CQ5VZR4 134 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 LCORLQ8N3X6 602 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 SDR42E1Q8WUS8 393 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 LPAR1Q92633 364 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 C2orf49Q9BVC5 232 aaPredicted RBP10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 TANGO6Q9C0B7 1094 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 RBPJLQ9UBG7 517 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 ARPP21Q9UBL0 812 aaPredicted RBP10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 GJD2Q9UKL4 321 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 STARD13Q9Y3M8 1113 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 SLC4A4Q9Y6R1 1079 aa10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 DDX60LQ5H9U9 1706 aaKnown RBP10.57□□□□□ -0.72
TNRC6B-208ENST00000489500 TCRBV5S4A2TA0A5A2 114 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 STRNO43815 780 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 GNAT2P19087 354 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 SEC13P55735 322 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 TYRO3Q06418 890 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 GABPAQ06546 454 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 SEPT2Q15019 361 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 CRTC2Q53ET0 693 aaPredicted RBP10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 LBX2Q6XYB7 198 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 GPR142Q7Z601 462 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 ALDH16A1Q8IZ83 802 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 SHISA4Q96DD7 197 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 EDC3Q96F86 508 aaKnown RBP10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 APBA2Q99767 749 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 RPAP3Q9H6T3 665 aaPredicted RBP10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 DCTPP1Q9H773 170 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
TNRC6B-208ENST00000489500 SLC15A5A6NIM6 579 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 H0YGN5 161 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 MSCO60682 206 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 SLC3A2P08195 630 aaKnown RBP10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 JAG1P78504 1218 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 ATP2B2Q01814 1243 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 ICA1Q05084 483 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 C12orf60Q5U649 245 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 GIMAP6Q6P9H5 292 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 TNFRSF25Q93038 417 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 NACAP1Q9BZK3 213 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 PPP1R12CQ9BZL4 782 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 MKNK2Q9HBH9 465 aa10.55□□□□□ -0.72
TNRC6B-208ENST00000489500 ZNFX1Q9P2E3 1918 aaKnown RBP10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 CENPFP49454 3210 aa10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 USP17L12C9JPN9 530 aa10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 USP17L21D6R901 530 aa10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 APPP05067 770 aa10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 CDK8P49336 464 aa10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 C8orf86Q6ZUL3 223 aa10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 DPP9Q86TI2 863 aa10.54□□□□□ -0.72
TNRC6B-208ENST00000489500 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms