RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 CATIPQ7Z7H3 387 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 FANCBQ8NB91 859 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.08
SCMH1-216ENST00000489421 TNPO1Q92973 898 aaKnown RBP8.3□□□□□ -1.08
SCMH1-216ENST00000489421 TRERF1Q96PN7 1200 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 PTPN18Q99952 460 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 RUBCNLQ9H714 662 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 MTMR4Q9NYA4 1195 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 HERC5Q9UII4 1024 aaKnown RBP8.3□□□□□ -1.08
SCMH1-216ENST00000489421 NAP1L2Q9ULW6 460 aaPredicted RBP8.3□□□□□ -1.08
SCMH1-216ENST00000489421 MTMR6Q9Y217 621 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 PCDHGA11Q9Y5H2 935 aa8.3□□□□□ -1.08
SCMH1-216ENST00000489421 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
SCMH1-216ENST00000489421 STX6O43752 255 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 CDKL5O76039 1030 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
SCMH1-216ENST00000489421 SKIP12755 728 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 NF2P35240 595 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 DGKZQ13574 1117 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 VGLL4Q14135 290 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 RTN1Q16799 776 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
SCMH1-216ENST00000489421 CPLX2Q6PUV4 134 aaKnown RBP8.29□□□□□ -1.08
SCMH1-216ENST00000489421 ARMC9Q7Z3E5 817 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 MICU3Q86XE3 530 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 RAB11FIP4Q86YS3 637 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
SCMH1-216ENST00000489421 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 CEP95Q96GE4 821 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 TMEM47Q9BQJ4 181 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 MYL10Q9BUA6 226 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 SNCAIPQ9Y6H5 919 aa8.29□□□□□ -1.08
SCMH1-216ENST00000489421 CPLX1O14810 134 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 DTNBO60941 627 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 ZSCAN22P10073 491 aaPredicted RBP8.28□□□□□ -1.08
SCMH1-216ENST00000489421 RXRAP19793 462 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 PLA2G4AP47712 749 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 TNNI2P48788 182 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 SMTNP53814 917 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 TNFAIP1Q13829 316 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 CERKLQ49MI3 558 aaPredicted RBP8.28□□□□□ -1.08
SCMH1-216ENST00000489421 NBPF11Q86T75 865 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 SIAH1Q8IUQ4 282 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 CRACR2BQ8N4Y2 399 aaPredicted RBP8.28□□□□□ -1.08
SCMH1-216ENST00000489421 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
SCMH1-216ENST00000489421 MKL1Q969V6 931 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 ACDQ96AP0 544 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 OPTNQ96CV9 577 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 DDX11Q96FC9 970 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 KAT14Q9H8E8 782 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 RBM28Q9NW13 759 aaKnown RBP8.28□□□□□ -1.08
SCMH1-216ENST00000489421 ORC3Q9UBD5 711 aaPredicted RBP8.28□□□□□ -1.08
SCMH1-216ENST00000489421 SERTAD1Q9UHV2 236 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 KIF3AQ9Y496 699 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 USP3Q9Y6I4 520 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 LAMA4Q16363 1823 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 A0A0G2JMZ2 1700 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 PLXNA1Q9UIW2 1896 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 STK36Q9NRP7 1315 aa8.28□□□□□ -1.08
SCMH1-216ENST00000489421 PALM3A6NDB9 673 aaPredicted RBP8.27□□□□□ -1.09
SCMH1-216ENST00000489421 RAD21O60216 631 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 TTLL1O95922 423 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 ZBTB48P10074 688 aaPredicted RBP8.27□□□□□ -1.09
SCMH1-216ENST00000489421 MX2P20592 715 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 INPP5BP32019 993 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 GUCY1A2P33402 732 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 JAG1P78504 1218 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 NCOA4Q13772 614 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 RRP1BQ14684 758 aaKnown RBP8.27□□□□□ -1.09
SCMH1-216ENST00000489421 GRM4Q14833 912 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 NFKBIBQ15653 356 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 SUPT20HL1Q3ZLR7 823 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 TMEM179Q6ZVK1 233 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 TMTC3Q6ZXV5 915 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 CCDC144CPQ8IYA2 1237 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 ANKRD13AQ8IZ07 590 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 NUP133Q8WUM0 1156 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 BRI3BPQ8WY22 251 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 ZKSCAN4Q969J2 545 aaPredicted RBP8.27□□□□□ -1.09
SCMH1-216ENST00000489421 KANSL2Q9H9L4 492 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 NYAP2Q9P242 653 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 STX8Q9UNK0 236 aa8.27□□□□□ -1.09
SCMH1-216ENST00000489421 FAM196BA6NMK8 535 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 PHF20L1A8MW92 1017 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 PRPF3O43395 683 aaKnown RBP8.26□□□□□ -1.09
SCMH1-216ENST00000489421 PPP1R12BO60237 982 aaPredicted RBP8.26□□□□□ -1.09
SCMH1-216ENST00000489421 BAG4O95429 457 aaKnown RBP8.26□□□□□ -1.09
SCMH1-216ENST00000489421 F13A1P00488 732 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 SNHG28P0DPA3 235 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 ATP4AP20648 1035 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 SMARCA1P28370 1054 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 KIF5BP33176 963 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 MCM4P33991 863 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 IREB2P48200 963 aaKnown RBP8.26□□□□□ -1.09
SCMH1-216ENST00000489421 GNAQP50148 359 aa8.26□□□□□ -1.09
SCMH1-216ENST00000489421 SSRP1Q08945 709 aaKnown RBP8.26□□□□□ -1.09
SCMH1-216ENST00000489421 CRHR2Q13324 411 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms