RNA–Protein interactions for RNA: ENST00000489302.5

PDZD8-203, Transcript of PDZ domain containing 8, humanhuman

TSL 3

Gene PDZD8, Length 740 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-203ENST00000489302 CUL5Q93034 780 aa11.78□□□□□ -0.52
PDZD8-203ENST00000489302 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
PDZD8-203ENST00000489302 MAF1Q9H063 256 aa11.78□□□□□ -0.52
PDZD8-203ENST00000489302 MAP3K20Q9NYL2 800 aaKnown RBP11.78□□□□□ -0.52
PDZD8-203ENST00000489302 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
PDZD8-203ENST00000489302 NKRFO15226 690 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDZD8-203ENST00000489302 PPFIA3O75145 1194 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 RAG1P15918 1043 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 RPS6KB1P23443 525 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 ITGB8P26012 769 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 PSMA5P28066 241 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 CDC27P30260 824 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 CCND2P30279 289 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 BMP8BP34820 402 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 ADD1P35611 737 aaKnown RBP11.77□□□□□ -0.53
PDZD8-203ENST00000489302 CPT1AP50416 773 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 CDK7P50613 346 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 GHRHRQ02643 423 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 BRDTQ58F21 947 aaPredicted RBP11.77□□□□□ -0.53
PDZD8-203ENST00000489302 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 ANKRD33Q7Z3H0 272 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 VSIG10LQ86VR7 867 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 AFG1LQ8WV93 481 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
PDZD8-203ENST00000489302 PSTPIP2Q9H939 334 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.53
PDZD8-203ENST00000489302 RTEL1Q9NZ71 1219 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 MRVI1Q9Y6F6 885 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 GRIN2DO15399 1336 aa11.77□□□□□ -0.53
PDZD8-203ENST00000489302 MEIS2O14770 477 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 CABYRO75952 493 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 RGS20O76081 388 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 GH1P01241 217 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 METAP2P50579 478 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDZD8-203ENST00000489302 PURAQ00577 322 aaKnown RBP11.76□□□□□ -0.53
PDZD8-203ENST00000489302 UBE2SQ16763 222 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 TDHQ8IZJ6 230 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 TOX2Q96NM4 488 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
PDZD8-203ENST00000489302 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
PDZD8-203ENST00000489302 DDX41Q9UJV9 622 aaKnown RBP11.76□□□□□ -0.53
PDZD8-203ENST00000489302 A6NJR5 290 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 SOX1O00570 391 aaPredicted RBP11.75□□□□□ -0.53
PDZD8-203ENST00000489302 KIAA0355O15063 1070 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 TLR3O15455 904 aaKnown RBP11.75□□□□□ -0.53
PDZD8-203ENST00000489302 NAPAP54920 295 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
PDZD8-203ENST00000489302 SP2Q02086 613 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 FUT2Q10981 343 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 FAM126BQ8IXS8 530 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 DHX37Q8IY37 1157 aaKnown RBP11.75□□□□□ -0.53
PDZD8-203ENST00000489302 LRCH3Q96II8 777 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
PDZD8-203ENST00000489302 UPF3BQ9BZI7 483 aaKnown RBP11.75□□□□□ -0.53
PDZD8-203ENST00000489302 MROH7Q68CQ1 1323 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 CNTNAP5Q8WYK1 1306 aa11.75□□□□□ -0.53
PDZD8-203ENST00000489302 A0A1W2PPC1 479 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 GGPS1O95749 300 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 MMP3P08254 477 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
PDZD8-203ENST00000489302 SHHQ15465 462 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 SLC43A3Q8NBI5 491 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 BCAS3Q9H6U6 928 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
PDZD8-203ENST00000489302 ZSWIM6Q9HCJ5 1215 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 CYP46A1Q9Y6A2 500 aa11.74□□□□□ -0.53
PDZD8-203ENST00000489302 RANBP2P49792 3224 aaKnown RBP11.74□□□□□ -0.53
PDZD8-203ENST00000489302 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 B4GALT4O60513 344 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 SLC34A2O95436 690 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 TIMP1P01033 207 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 CD4P01730 458 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 CYP2C18P33260 490 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 EPHB4P54760 987 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 LAMC2Q13753 1193 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 PHKBQ93100 1093 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 SPATA33Q96N06 139 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 ALDH8A1Q9H2A2 487 aaPredicted RBP11.73□□□□□ -0.53
PDZD8-203ENST00000489302 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 TRMT13Q9NUP7 481 aaKnown RBP11.73□□□□□ -0.53
PDZD8-203ENST00000489302 TBX21Q9UL17 535 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 PCDHA6Q9UN73 950 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 PCDHA8Q9Y5H6 950 aa11.73□□□□□ -0.53
PDZD8-203ENST00000489302 KIAA1217Q5T5P2 1943 aa11.72□□□□□ -0.53
PDZD8-203ENST00000489302 UMODL1Q5DID0 1318 aa11.72□□□□□ -0.53
PDZD8-203ENST00000489302 SMCO2A6NFE2 343 aa11.72□□□□□ -0.53
PDZD8-203ENST00000489302 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
PDZD8-203ENST00000489302 STXBP3O00186 592 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms