RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MYL3P08590 195 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 CDC27P30260 824 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 ADD1P35611 737 aaKnown RBP16.42■□□□□ 0.22
BRCA1-218ENST00000489037 ANAPC15P60006 121 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 GNPTABQ3T906 1256 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 USP17L6PQ6QN14 398 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
BRCA1-218ENST00000489037 TOX2Q96NM4 488 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
BRCA1-218ENST00000489037 TRIOBPQ9H2D6 2365 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 ARVCFO00192 962 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 CLTBP09497 229 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 LY6KQ17RY6 165 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
BRCA1-218ENST00000489037 XRRA1Q6P2D8 792 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 TEX2Q8IWB9 1127 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 COPS5Q92905 334 aa16.41■□□□□ 0.22
BRCA1-218ENST00000489037 UPF3BQ9BZI7 483 aaKnown RBP16.41■□□□□ 0.22
BRCA1-218ENST00000489037 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
BRCA1-218ENST00000489037 MEIS2O14770 477 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 ARIH2O95376 493 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 TGFB3P10600 412 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 PTGS1P23219 599 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 PDIA3P30101 505 aaKnown RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 MAGEA10P43363 369 aaPredicted RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 FUT2Q10981 343 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 ITGA7Q13683 1181 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 CPLX2Q6PUV4 134 aaKnown RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 ANKRD33Q7Z3H0 272 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 DHX37Q8IY37 1157 aaKnown RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 CCDC12Q8WUD4 166 aaPredicted RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 ZNF274Q96GC6 653 aaPredicted RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 MTG1Q9BT17 334 aaPredicted RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 UBE2OQ9C0C9 1292 aaKnown RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 TMEM39AQ9NV64 488 aa16.4■□□□□ 0.22
BRCA1-218ENST00000489037 DDX41Q9UJV9 622 aaKnown RBP16.4■□□□□ 0.22
BRCA1-218ENST00000489037 NID2Q14112 1375 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 A0A1W2PPC1 479 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 A6NJR5 290 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 CPLX1O14810 134 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 SCG2P13521 617 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 BMP8BP34820 402 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 CDK7P50613 346 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 ADCY7P51828 1080 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 EVCP57679 992 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 CCT2P78371 535 aaKnown RBP16.39■□□□□ 0.21
BRCA1-218ENST00000489037 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
BRCA1-218ENST00000489037 TOB2Q14106 344 aaPredicted RBP16.39■□□□□ 0.21
BRCA1-218ENST00000489037 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
BRCA1-218ENST00000489037 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 IL31RAQ8NI17 732 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 GDF15Q99988 308 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 RIC8AQ9NPQ8 531 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 PDLIM7Q9NR12 457 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 FRMPD4Q14CM0 1322 aa16.39■□□□□ 0.21
BRCA1-218ENST00000489037 SMCO2A6NFE2 343 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
BRCA1-218ENST00000489037 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
BRCA1-218ENST00000489037 RAG1P15918 1043 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 PURAQ00577 322 aaKnown RBP16.38■□□□□ 0.21
BRCA1-218ENST00000489037 ARHGAP1Q07960 439 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 ANKRD1Q15327 319 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 UBE2SQ16763 222 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 PCNX4Q63HM2 1172 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 AFG1LQ8WV93 481 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 PCDHA6Q9UN73 950 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 PCDHA8Q9Y5H6 950 aa16.38■□□□□ 0.21
BRCA1-218ENST00000489037 STXBP3O00186 592 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 KIAA0355O15063 1070 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 IFNAR1P17181 557 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 FAAP100Q0VG06 881 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 NEDD9Q14511 834 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 DGKDQ16760 1214 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 EMID1Q96A84 441 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-218ENST00000489037 ZFP91Q96JP5 570 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-218ENST00000489037 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 RNF26Q9BY78 433 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-218ENST00000489037 C6orf50Q9HD87 102 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 RTEL1Q9NZ71 1219 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
BRCA1-218ENST00000489037 TRIM43BA6NCK2 446 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 FIBPO43427 364 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 RGS20O76081 388 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 GGPS1O95749 300 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 MMP3P08254 477 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 ICAM3P32942 547 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 CHMP4BP1P59074 171 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 PSMC6P62333 389 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
BRCA1-218ENST00000489037 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
BRCA1-218ENST00000489037 STK3Q13188 491 aa16.36■□□□□ 0.21
BRCA1-218ENST00000489037 FAM47CQ5HY64 1035 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms