RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 PCMTD1Q96MG8 357 aaPredicted RBP15.82■□□□□ 0.12
ABCB1-207ENST00000488737 DDX25Q9UHL0 483 aaKnown RBP15.82■□□□□ 0.12
ABCB1-207ENST00000488737 KDM3AQ9Y4C1 1321 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 ADAMTSL1Q8N6G6 1762 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 POTEMA6NI47 508 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 RIMBP2O15034 1052 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 PPP1R11O60927 126 aaPredicted RBP15.82■□□□□ 0.12
ABCB1-207ENST00000488737 SMC1AQ14683 1233 aaKnown RBP15.82■□□□□ 0.12
ABCB1-207ENST00000488737 BEND6Q5SZJ8 279 aaPredicted RBP15.82■□□□□ 0.12
ABCB1-207ENST00000488737 ARHGAP27Q6ZUM4 889 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 PURBQ96QR8 312 aaKnown RBP15.82■□□□□ 0.12
ABCB1-207ENST00000488737 TSG101Q99816 390 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 NDST4Q9H3R1 872 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 TRIM10Q9UDY6 481 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 PLAGL2Q9UPG8 496 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 SIK3Q9Y2K2 1263 aa15.82■□□□□ 0.12
ABCB1-207ENST00000488737 SIPA1L1O43166 1804 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 KLK7P49862 253 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 VAV2P52735 878 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
ABCB1-207ENST00000488737 CDC42EP5Q6NZY7 148 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 HDXQ7Z353 690 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 DDX12PQ92771 950 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 HPS3Q969F9 1004 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 TEKT1Q969V4 418 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 PNKPQ96T60 521 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 EDEM3Q9BZQ6 932 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 NT5C3AQ9H0P0 336 aa15.81■□□□□ 0.12
ABCB1-207ENST00000488737 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
ABCB1-207ENST00000488737 NPR1P16066 1061 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 CKAP4Q07065 602 aaKnown RBP15.8■□□□□ 0.12
ABCB1-207ENST00000488737 UBE2SQ16763 222 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 CCDC96Q2M329 555 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 WDR93Q6P2C0 686 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 HAS1Q92839 578 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 SAR1BQ9Y6B6 198 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 F8W031 263 aaPredicted RBP15.8■□□□□ 0.12
ABCB1-207ENST00000488737 MCM3P25205 808 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 OAS2P29728 719 aaKnown RBP15.8■□□□□ 0.12
ABCB1-207ENST00000488737 LRRC55Q6ZSA7 311 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 DYMQ7RTS9 669 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 CLEC10AQ8IUN9 316 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 DCAF4Q8WV16 495 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 NUDT12Q9BQG2 462 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 PSTPIP2Q9H939 334 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
ABCB1-207ENST00000488737 LCA5LO95447 670 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 ALDH1B1P30837 517 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 KIF5AQ12840 1032 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 GPS2Q13227 327 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 SPA17Q15506 151 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 MCTP2Q6DN12 878 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 NCAPH2Q6IBW4 605 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 TTBK2Q6IQ55 1244 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 APOBEC3HQ6NTF7 200 aaKnown RBP15.79■□□□□ 0.12
ABCB1-207ENST00000488737 KCNK18Q7Z418 384 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 MKL1Q969V6 931 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 DNAJC19Q96DA6 116 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 EEF2KMTQ96G04 330 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 CCDC42Q96M95 316 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 MRIQ9BWK5 157 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 DHX36Q9H2U1 1008 aaKnown RBP15.79■□□□□ 0.12
ABCB1-207ENST00000488737 L1RE1Q9UN81 338 aa15.79■□□□□ 0.12
ABCB1-207ENST00000488737 USP17L10C9JJH3 530 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 ATP1A1P05023 1023 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 IDEP14735 1019 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 CYP2C19P33261 490 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 USP11P51784 963 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 COASYQ13057 564 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 MOXD1Q6UVY6 613 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 MYOCDQ8IZQ8 938 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 NYAP2Q9P242 653 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 PCDHA12Q9UN75 941 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 COL11A2P13942 1736 aaPredicted RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 CYP3A7-CYP3A51PA0A087WV96 503 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 PLSCR1O15162 318 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 MARCH6O60337 910 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 USO1O60763 962 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 EIF3JO75822 258 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 CYP3A7P24462 503 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 VSNL1P62760 191 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 ZCWPW2Q504Y3 356 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 TAF3Q5VWG9 929 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 NOA1Q8NC60 698 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 SECISBP2LQ93073 1101 aaKnown RBP15.78■□□□□ 0.12
ABCB1-207ENST00000488737 CEP63Q96MT8 703 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 MBOAT7Q96N66 472 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 LACRTQ9GZZ8 138 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 ABCB6Q9NP58 842 aa15.78■□□□□ 0.12
ABCB1-207ENST00000488737 TARSL2A2RTX5 802 aaKnown RBP15.77■□□□□ 0.11
ABCB1-207ENST00000488737 CCDC66A2RUB6 948 aa15.77■□□□□ 0.11
ABCB1-207ENST00000488737 RCCD1A6NED2 376 aa15.77■□□□□ 0.11
ABCB1-207ENST00000488737 TFRCP02786 760 aaKnown RBP15.77■□□□□ 0.11
ABCB1-207ENST00000488737 RHOXF2BP0C7M4 288 aa15.77■□□□□ 0.11
ABCB1-207ENST00000488737 SCNN1DP51172 638 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms