RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SRRDQ9UH36 339 aa5□□□□□ -1.61
CD46-215ENST00000488596 R3HCC1Q9Y3T6 440 aaKnown RBP5□□□□□ -1.61
CD46-215ENST00000488596 NPHP3-ACAD11A0A0J9YXS1 232 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 PPM1BO75688 479 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 FUCA1P04066 466 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 PAMP19021 973 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 CASP7P55210 303 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 AMPD2Q01433 879 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 SLC7A5Q01650 507 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 TBC1D10BQ4KMP7 808 aaPredicted RBP4.99□□□□□ -1.61
CD46-215ENST00000488596 LARP1BQ659C4 914 aaKnown RBP4.99□□□□□ -1.61
CD46-215ENST00000488596 MBLAC2Q68D91 279 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 DPH6Q7L8W6 267 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 FAM26EQ8N5C1 309 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 CELF2-AS1Q8N7Q2 184 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 ZNF513Q8N8E2 541 aaPredicted RBP4.99□□□□□ -1.61
CD46-215ENST00000488596 DPF3Q92784 378 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 ARMC5Q96C12 935 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 RCC1LQ96I51 464 aaKnown RBP4.99□□□□□ -1.61
CD46-215ENST00000488596 C11orf84Q9BUA3 381 aaPredicted RBP4.99□□□□□ -1.61
CD46-215ENST00000488596 PHAXQ9H814 394 aaKnown RBP4.99□□□□□ -1.61
CD46-215ENST00000488596 ACTR10Q9NZ32 417 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.99□□□□□ -1.61
CD46-215ENST00000488596 SLC12A7Q9Y666 1083 aa4.99□□□□□ -1.61
CD46-215ENST00000488596 MATN3O15232 486 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 SMARCA5O60264 1052 aaPredicted RBP4.98□□□□□ -1.61
CD46-215ENST00000488596 PLATP00750 562 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 CYP2C8P10632 490 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 RAB33AQ14088 237 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 RGL3Q3MIN7 710 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 CCDC144BQ3MJ40 725 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 TNNI3KQ59H18 835 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 STK32CQ86UX6 486 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 PLEKHO2Q8TD55 490 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 TRIM55Q9BYV6 548 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 GPRC5CQ9NQ84 441 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 CLEC1BQ9P126 229 aa4.98□□□□□ -1.61
CD46-215ENST00000488596 SGSM2O43147 1006 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 NPHS1O60500 1241 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 THBS2P35442 1172 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 GRB10Q13322 594 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 CPZQ66K79 652 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 COPS5Q92905 334 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 C8orf49Q96NF6 230 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 SSBP3Q9BWW4 388 aaPredicted RBP4.97□□□□□ -1.61
CD46-215ENST00000488596 MARCH2Q9P0N8 246 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 APEX2Q9UBZ4 518 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 SUGT1Q9Y2Z0 365 aa4.97□□□□□ -1.61
CD46-215ENST00000488596 TRBV23OR9-2A0A075B6M9 112 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 CCDC85CA6NKD9 419 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 B2RBV5 119 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 DDAH1O94760 285 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 PLS3P13797 630 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 ZNF20P17024 532 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 RPL13P26373 211 aaKnown RBP4.96□□□□□ -1.62
CD46-215ENST00000488596 SOGA3Q5TF21 947 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 MCTP2Q6DN12 878 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 C6orf15Q6UXA7 325 aaPredicted RBP4.96□□□□□ -1.62
CD46-215ENST00000488596 CD300LDQ6UXZ3 194 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 ETV3LQ6ZN32 361 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 C19orf47Q8N9M1 422 aaKnown RBP4.96□□□□□ -1.62
CD46-215ENST00000488596 KYQ8NBH2 561 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 LOXL4Q96JB6 756 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 SAMD11Q96NU1 681 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 MMP19Q99542 508 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 C1QTNF3Q9BXJ4 246 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 ZSWIM4Q9H7M6 989 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 AKT3Q9Y243 479 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 INVSQ9Y283 1065 aa4.96□□□□□ -1.62
CD46-215ENST00000488596 LOC105371045A0A1W2PR82 267 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 C1QTNF3-AMACRE9PGA6 284 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 U2SURPO15042 1029 aaKnown RBP4.95□□□□□ -1.62
CD46-215ENST00000488596 KCNH1O95259 989 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 GJB6O95452 261 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 SCRN1Q12765 414 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 FXNQ16595 210 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 INF2Q27J81 1249 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 PRR31Q5SQ13 230 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 KIAA1211LQ6NV74 962 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 VHLLQ6RSH7 139 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 MIB1Q86YT6 1006 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 TEX2Q8IWB9 1127 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 FAM178BQ8IXR5 827 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 SORCS2Q96PQ0 1159 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 PIF1Q9H611 641 aa4.95□□□□□ -1.62
CD46-215ENST00000488596 MROH6A6NGR9 719 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 ITGA1P56199 1179 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 CYP4F3Q08477 520 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 KIAA2012Q0VF49 1180 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 SERINC3Q13530 473 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 BMS1Q14692 1282 aaKnown RBP4.94□□□□□ -1.62
CD46-215ENST00000488596 DDR2Q16832 855 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 FAM26FQ5R3K3 315 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 LIMS2Q7Z4I7 341 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 DCP2Q8IU60 420 aaKnown RBP4.94□□□□□ -1.62
CD46-215ENST00000488596 TTC9BQ8N6N2 239 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 TXNDC5Q8NBS9 432 aaKnown RBP4.94□□□□□ -1.62
CD46-215ENST00000488596 SLC16A11Q8NCK7 471 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 LGR4Q9BXB1 951 aa4.94□□□□□ -1.62
CD46-215ENST00000488596 OSBPL2Q9H1P3 480 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms