RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
COL9A2-208ENST00000488463 ARHGAP1Q07960 439 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 NTRK3Q16288 839 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 WWC2Q6AWC2 1192 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 TOX2Q96NM4 488 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 DDX41Q9UJV9 622 aaKnown RBP16.39■□□□□ 0.21
COL9A2-208ENST00000488463 ARVCFO00192 962 aa16.38■□□□□ 0.21
COL9A2-208ENST00000488463 SEC24BO95487 1268 aa16.38■□□□□ 0.21
COL9A2-208ENST00000488463 PURAQ00577 322 aaKnown RBP16.38■□□□□ 0.21
COL9A2-208ENST00000488463 FAAP100Q0VG06 881 aa16.38■□□□□ 0.21
COL9A2-208ENST00000488463 LY6KQ17RY6 165 aa16.38■□□□□ 0.21
COL9A2-208ENST00000488463 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.21
COL9A2-208ENST00000488463 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
COL9A2-208ENST00000488463 A0A0U1RQG5 324 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-208ENST00000488463 KIAA0355O15063 1070 aa16.37■□□□□ 0.21
COL9A2-208ENST00000488463 PQBP1O60828 265 aaKnown RBP16.37■□□□□ 0.21
COL9A2-208ENST00000488463 CABYRO75952 493 aa16.37■□□□□ 0.21
COL9A2-208ENST00000488463 PDIA3P30101 505 aaKnown RBP16.37■□□□□ 0.21
COL9A2-208ENST00000488463 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL9A2-208ENST00000488463 SP2Q02086 613 aa16.37■□□□□ 0.21
COL9A2-208ENST00000488463 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
COL9A2-208ENST00000488463 EMID1Q96A84 441 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-208ENST00000488463 ZFP91Q96JP5 570 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-208ENST00000488463 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
COL9A2-208ENST00000488463 PSTPIP2Q9H939 334 aa16.37■□□□□ 0.21
COL9A2-208ENST00000488463 DOCK5Q9H7D0 1870 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 STXBP3O00186 592 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 CD4P01730 458 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 CLTBP09497 229 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 MYCLP12524 364 aaPredicted RBP16.36■□□□□ 0.21
COL9A2-208ENST00000488463 CCND2P30279 289 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 CPT1AP50416 773 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 FGD1P98174 961 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 SEMA3FQ13275 785 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 PKN1Q16512 942 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 FAM126BQ8IXS8 530 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 INPP4AQ96PE3 977 aaPredicted RBP16.36■□□□□ 0.21
COL9A2-208ENST00000488463 TBX21Q9UL17 535 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
COL9A2-208ENST00000488463 A0A1W2PPC1 479 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 ZEB2O60315 1214 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 HOXD8P13378 290 aaPredicted RBP16.35■□□□□ 0.21
COL9A2-208ENST00000488463 ANAPC15P60006 121 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 PSMC6P62333 389 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 MDM2Q00987 491 aaPredicted RBP16.35■□□□□ 0.21
COL9A2-208ENST00000488463 ITGA7Q13683 1181 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 UBE2SQ16763 222 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 PPP1R18Q6NYC8 613 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 AFG1LQ8WV93 481 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 BCAS3Q9H6U6 928 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 POLR3EQ9NVU0 708 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 BARHL2Q9NY43 387 aa16.35■□□□□ 0.21
COL9A2-208ENST00000488463 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 GH1P01241 217 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 MMP3P08254 477 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 ICAM3P32942 547 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 PFKFB3Q16875 520 aaPredicted RBP16.34■□□□□ 0.21
COL9A2-208ENST00000488463 MYSM1Q5VVJ2 828 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 PCNX4Q63HM2 1172 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 SMARCC2Q8TAQ2 1214 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 ALDH8A1Q9H2A2 487 aaPredicted RBP16.34■□□□□ 0.21
COL9A2-208ENST00000488463 NCOA5Q9HCD5 579 aaKnown RBP16.34■□□□□ 0.21
COL9A2-208ENST00000488463 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
COL9A2-208ENST00000488463 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 CHD9Q3L8U1 2897 aa16.34■□□□□ 0.21
COL9A2-208ENST00000488463 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 SPATA31C2B4DYI2 1134 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 hCG_1984214I3L0E3 225 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 STAM2O75886 525 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 MYL3P08590 195 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 TGFB3P10600 412 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 IFNAR1P17181 557 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 UBA1P22314 1058 aaKnown RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 CLK2P49760 499 aaKnown RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 XRRA1Q6P2D8 792 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 KCNV1Q6PIU1 500 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 TEX2Q8IWB9 1127 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 ZNF713Q8N859 430 aaPredicted RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 KAT2BQ92831 832 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 BADQ92934 168 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 CUL5Q93034 780 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 VTI1AQ96AJ9 217 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 MTG1Q9BT17 334 aaPredicted RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 PRDM5Q9NQX1 630 aaPredicted RBP16.33■□□□□ 0.2
COL9A2-208ENST00000488463 MROH7Q68CQ1 1323 aa16.33■□□□□ 0.2
COL9A2-208ENST00000488463 SCG2P13521 617 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 NAPAP54920 295 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
COL9A2-208ENST00000488463 CELF3Q5SZQ8 465 aaKnown RBP16.32■□□□□ 0.2
COL9A2-208ENST00000488463 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms