RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SEC14L1Q92503 715 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 KCNN1Q92952 543 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 OSBP2Q969R2 916 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 PHF20Q9BVI0 1012 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 PCDHA2Q9Y5H9 948 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 BAZ1AQ9NRL2 1556 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-214ENST00000488427 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 F8W031 263 aaPredicted RBP6.42□□□□□ -1.38
ITGB1-214ENST00000488427 RFXAPO00287 272 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 KRIT1O00522 736 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 DIAPH1O60610 1272 aaKnown RBP6.42□□□□□ -1.38
ITGB1-214ENST00000488427 GLI4P10075 376 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 GALK1P51570 392 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 SF1Q15637 639 aaKnown RBP6.42□□□□□ -1.38
ITGB1-214ENST00000488427 PLEKHN1Q494U1 663 aaPredicted RBP6.42□□□□□ -1.38
ITGB1-214ENST00000488427 RPTNQ6XPR3 784 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 CEP68Q76N32 757 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 TMC6Q7Z403 805 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 NOP9Q86U38 636 aaKnown RBP6.42□□□□□ -1.38
ITGB1-214ENST00000488427 Q8N1Y9 231 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 MTA3Q9BTC8 594 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 RNF38Q9H0F5 515 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 EPB41L1Q9H4G0 881 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 PCDH18Q9HCL0 1135 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 CLDND1Q9NY35 253 aa6.42□□□□□ -1.38
ITGB1-214ENST00000488427 THOC2Q8NI27 1593 aaKnown RBP6.42□□□□□ -1.38
ITGB1-214ENST00000488427 GSTA4O15217 222 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 MSL3P1P0C860 447 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 BCL6P41182 706 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 INF2Q27J81 1249 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 SIAH1Q8IUQ4 282 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 JMYQ8N9B5 988 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 RCBTB1Q8NDN9 531 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 TSPAN17Q96FV3 270 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 NGRNQ9NPE2 291 aaKnown RBP6.41□□□□□ -1.38
ITGB1-214ENST00000488427 MRPS23Q9Y3D9 190 aaKnown RBP6.41□□□□□ -1.38
ITGB1-214ENST00000488427 X6R8D5 127 aa6.41□□□□□ -1.38
ITGB1-214ENST00000488427 FAM47E-STBD1D6RA91 191 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 FAM153BP0C7A2 387 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 VIPR1P32241 457 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 SPIRE1Q08AE8 756 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 LILRA6Q6PI73 481 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 LBX2Q6XYB7 198 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 MTDHQ86UE4 582 aaKnown RBP6.4□□□□□ -1.38
ITGB1-214ENST00000488427 C1QL4Q86Z23 238 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 CCDC103Q8IW40 242 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 NLGN1Q8N2Q7 840 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 PLEKHO2Q8TD55 490 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 DDX11Q96FC9 970 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 KLHL14Q9P2G3 628 aa6.4□□□□□ -1.38
ITGB1-214ENST00000488427 NTRK1P04629 796 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 ZSCAN22P10073 491 aaPredicted RBP6.39□□□□□ -1.39
ITGB1-214ENST00000488427 DLG4P78352 724 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 CYP4F3Q08477 520 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 KIR3DS1Q14943 382 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 YOD1Q5VVQ6 348 aaPredicted RBP6.39□□□□□ -1.39
ITGB1-214ENST00000488427 MBLAC2Q68D91 279 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 CYP4F22Q6NT55 531 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 LCNL1Q6ZST4 164 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 TEX2Q8IWB9 1127 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 PHOSPHO1Q8TCT1 267 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 ALG3Q92685 438 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 YIPF4Q9BSR8 244 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 MRPL4Q9BYD3 311 aaKnown RBP6.39□□□□□ -1.39
ITGB1-214ENST00000488427 MCOLN1Q9GZU1 580 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 TMEFF2Q9UIK5 374 aaPredicted RBP6.39□□□□□ -1.39
ITGB1-214ENST00000488427 FAN1Q9Y2M0 1017 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 PTCH2Q9Y6C5 1203 aa6.39□□□□□ -1.39
ITGB1-214ENST00000488427 ZC3H12DA2A288 527 aaKnown RBP6.38□□□□□ -1.39
ITGB1-214ENST00000488427 HGSO14964 777 aaPredicted RBP6.38□□□□□ -1.39
ITGB1-214ENST00000488427 N4BP3O15049 544 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 EFEMP2O95967 443 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 NCAM1P13591 858 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 SDHBP21912 280 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 GRK2P25098 689 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 GRK3P35626 688 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 PRR5P85299 388 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 PAK1Q13153 545 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 FAM47CQ5HY64 1035 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 FAM209AQ5JX71 171 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 DENND5AQ6IQ26 1287 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 EP400NLQ6ZTU2 488 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 ZC3H18Q86VM9 953 aaKnown RBP6.38□□□□□ -1.39
ITGB1-214ENST00000488427 HOMER1Q86YM7 354 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 TMEM151BQ8IW70 566 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 TRIM48Q8IWZ4 208 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 DPF3Q92784 378 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 SIGLEC10Q96LC7 697 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 SFMBT1Q9UHJ3 866 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 IRAK3Q9Y616 596 aa6.38□□□□□ -1.39
ITGB1-214ENST00000488427 FPR2P25090 351 aa6.37□□□□□ -1.39
ITGB1-214ENST00000488427 ZNF385BQ569K4 471 aa6.37□□□□□ -1.39
ITGB1-214ENST00000488427 SH3TC2Q8TF17 1288 aa6.37□□□□□ -1.39
ITGB1-214ENST00000488427 MZB1Q8WU39 189 aa6.37□□□□□ -1.39
ITGB1-214ENST00000488427 MAGEB10Q96LZ2 347 aaPredicted RBP6.37□□□□□ -1.39
ITGB1-214ENST00000488427 MBD1Q9UIS9 605 aaPredicted RBP6.37□□□□□ -1.39
ITGB1-214ENST00000488427 ZNF652Q9Y2D9 606 aa6.37□□□□□ -1.39
ITGB1-214ENST00000488427 NCANO14594 1321 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms