RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 C11orf84Q9BUA3 381 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 SLC12A7Q9Y666 1083 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 VAMP4O75379 141 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 NTRK1P04629 796 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 FGRP09769 529 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 SEPHS1P49903 392 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 TCEAL1Q15170 157 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 FAM26FQ5R3K3 315 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 FAM26EQ8N5C1 309 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 ANAPC16Q96DE5 110 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 MENTQ9BUN1 341 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 SSBP3Q9BWW4 388 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 TRIM55Q9BYV6 548 aa5.74□□□□□ -1.49
HMGB1P36-201ENST00000487709 FUCA1P04066 466 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 GUCY2CP25092 1073 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 CD300LDQ6UXZ3 194 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 ETV3LQ6ZN32 361 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 MCF2L2Q86YR7 1114 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 KYQ8NBH2 561 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 PPT2Q9UMR5 302 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 DIS3Q9Y2L1 958 aaKnown RBP5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 BACE2Q9Y5Z0 518 aa5.73□□□□□ -1.49
HMGB1P36-201ENST00000487709 A0A087WZG4 1122 aa5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 ICAM4Q14773 271 aa5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 CDSNQ15517 529 aa5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 CCDC81Q6ZN84 652 aa5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 TXNDC5Q8NBS9 432 aaKnown RBP5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 HAUS7Q99871 368 aa5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 ZNF214Q9UL59 606 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 TSC22D4Q9Y3Q8 395 aa5.72□□□□□ -1.49
HMGB1P36-201ENST00000487709 NPHP3-ACAD11A0A0J9YXS1 232 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 C2orf71A6NGG8 1288 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 DDX3XO00571 662 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 CYR61O00622 381 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 PAMP19021 973 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 NBPF6Q5VWK0 638 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 ADAT2Q7Z6V5 191 aaKnown RBP5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 DCP2Q8IU60 420 aaKnown RBP5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 PALM2Q8IXS6 379 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 RBBP8NLQ8NC74 664 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 NBPF4Q96M43 638 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 GBP3Q9H0R5 595 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 VPS11Q9H270 941 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 WHRNQ9P202 907 aa5.71□□□□□ -1.5
HMGB1P36-201ENST00000487709 C7orf72A4D263 438 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 LAMTOR5O43504 91 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 NPHS1O60500 1241 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 ACVRL1P37023 503 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 KRTAP1-1Q07627 177 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 CRB2Q5IJ48 1285 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 TTLL6Q8N841 843 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 C19orf47Q8N9M1 422 aaKnown RBP5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 LCORQ96JN0 433 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 FGD4Q96M96 766 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 KLC2Q9H0B6 622 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 AP5M1Q9H0R1 490 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 ACTR10Q9NZ32 417 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 MARCH2Q9P0N8 246 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 PPP4R1LQ9P1A2 415 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 PRKAG3Q9UGI9 489 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 LTBP3Q9NS15 1303 aa5.7□□□□□ -1.5
HMGB1P36-201ENST00000487709 B4GALT3O60512 393 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 FZD7O75084 574 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 GIPRP48546 466 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 ITGA1P56199 1179 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 AMPD2Q01433 879 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 PPP2R5EQ16537 467 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 GNPTABQ3T906 1256 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 HEATR6Q6AI08 1181 aaKnown RBP5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 ZNF585AQ6P3V2 769 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 USP51Q70EK9 711 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 ZNF747Q9BV97 191 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 SLITRK6Q9H5Y7 841 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 ZNF408Q9H9D4 720 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 PCDH18Q9HCL0 1135 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 BTG4Q9NY30 223 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 CGGBP1Q9UFW8 167 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 MRVI1Q9Y6F6 885 aa5.69□□□□□ -1.5
HMGB1P36-201ENST00000487709 AMHP03971 560 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 EPHX1P07099 455 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 STAT5AP42229 794 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 FXNQ16595 210 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 PRR31Q5SQ13 230 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 PRAMEF18Q5VWM3 479 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 ZC3H18Q86VM9 953 aaKnown RBP5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 SHDQ96IW2 340 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 KLHL25Q9H0H3 589 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 CLEC1BQ9P126 229 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 PCDHB10Q9UN67 800 aa5.68□□□□□ -1.5
HMGB1P36-201ENST00000487709 TRBV23OR9-2A0A075B6M9 112 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 NPEPPSL1A6NEC2 478 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 SGSM2O43147 1006 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 PPM1BO75688 479 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 CYP1A1P04798 512 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 NAT2P11245 290 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 MBLAC2Q68D91 279 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 ANKS3Q6ZW76 656 aa5.67□□□□□ -1.5
HMGB1P36-201ENST00000487709 PLEKHH3Q7Z736 793 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms