RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 FAM105AQ9NUU6 356 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 BSDC1Q9NW68 430 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 FAM8A1Q9UBU6 413 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 AP4E1Q9UPM8 1137 aa6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 MKI67P46013 3256 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-218ENST00000487294 UBE2Q2LH0YL09 131 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 TMPRSS2O15393 492 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 ADAMTS4O75173 837 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 PAGE1O75459 146 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 WNT11O96014 354 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 BMP6P22004 513 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 GNA15P30679 374 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 NBPF9Q3BBW0 867 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 INTS3Q68E01 1043 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 ANKRD18AQ8IVF6 992 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 SHISA5Q8N114 240 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 TTLL11Q8NHH1 800 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 SHKBP1Q8TBC3 707 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 KCNB2Q92953 911 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 FRMD6Q96NE9 622 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 CDC5LQ99459 802 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 DUSP9Q99956 384 aaKnown RBP6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 METTL22Q9BUU2 404 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 COA1Q9GZY4 146 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 KRT82Q9NSB4 513 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 IFT57Q9NWB7 429 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 CWC25Q9NXE8 425 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 HDAC9Q9UKV0 1011 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 PPM1HQ9ULR3 514 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 LEMD3Q9Y2U8 911 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 PCDHGC5Q9Y5F6 944 aa6.54□□□□□ -1.36
R3HDM1-218ENST00000487294 MYBBP1AQ9BQG0 1328 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 FKTNO75072 461 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 TBC1D8O95759 1140 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 NFICP08651 508 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 ZBTB48P10074 688 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 NF2P35240 595 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 ASPAP45381 313 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 CTSWP56202 376 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 ZNF252P-AS1Q0IIN9 211 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 PAOXQ6QHF9 649 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 C15orf52Q6ZUT6 534 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 MOB2Q70IA6 237 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 APOBEC3FQ8IUX4 373 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 GRIN3AQ8TCU5 1115 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 PLA2G12BQ9BX93 195 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 CEP44Q9C0F1 390 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 SEMA6CQ9H3T2 930 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 ACSS3Q9H6R3 686 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 PHAXQ9H814 394 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 CRIM1Q9NZV1 1036 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 MINPP1Q9UNW1 487 aa6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 RBBP6Q7Z6E9 1792 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-218ENST00000487294 CENPFP49454 3210 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 BRCA2P51587 3418 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 KIAA0100Q14667 2235 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 MANSC4A6NHS7 340 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 WTIPA6NIX2 430 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 DDX58O95786 925 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 IGKV5-2P06315 115 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 SLFN14P0C7P3 912 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 RAB6AP20340 208 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 EIF4BP23588 611 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 CCT4P50991 539 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 GNAI1P63096 354 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 CALD1Q05682 793 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 RASIP1Q5U651 963 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 KSR2Q6VAB6 950 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 ARMC9Q7Z3E5 817 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 ARMC5Q96C12 935 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 MYD88Q99836 296 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 YIPF2Q9BWQ6 316 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 R3HDMLQ9H3Y0 253 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 CACNA2D2Q9NY47 1150 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 MYH3P11055 1940 aa6.52□□□□□ -1.37
R3HDM1-218ENST00000487294 IRS2Q9Y4H2 1338 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 F13BP05160 661 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 CSF1RP07333 972 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 CELA3AP09093 270 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 ADMP35318 185 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 FKBP1AP62942 108 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 ID3Q02535 119 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 CCDC27Q2M243 656 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 CCDC30Q5VVM6 783 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 PRAMEF18Q5VWM3 479 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 TTLL5Q6EMB2 1281 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 OTOP1Q7RTM1 612 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 FBXO33Q7Z6M2 555 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 CCDC146Q8IYE0 955 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 FBXL6Q8N531 539 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 GIMAP7Q8NHV1 300 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 GPBAR1Q8TDU6 330 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 ZNF428Q96B54 188 aa6.51□□□□□ -1.37
R3HDM1-218ENST00000487294 EMILIN2Q9BXX0 1053 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms