RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 IDEP14735 1019 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 APOBEC3HQ6NTF7 200 aaKnown RBP13.72□□□□□ -0.21
PTCD2-204ENST00000486995 CUL5Q93034 780 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 IQCDQ96DY2 449 aa13.72□□□□□ -0.21
PTCD2-204ENST00000486995 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
PTCD2-204ENST00000486995 ZC3H12CQ9C0D7 883 aaKnown RBP13.72□□□□□ -0.21
PTCD2-204ENST00000486995 PLEKP08567 350 aaPredicted RBP13.71□□□□□ -0.21
PTCD2-204ENST00000486995 LRRC63Q05C16 580 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 MAN2A1Q16706 1144 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 GPATCH4Q5T3I0 446 aaKnown RBP13.71□□□□□ -0.21
PTCD2-204ENST00000486995 LRRC55Q6ZSA7 311 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 KCTD1Q719H9 257 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 EHBP1Q8NDI1 1231 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 DNAJC19Q96DA6 116 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 SUGCTQ9HAC7 445 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.71□□□□□ -0.21
PTCD2-204ENST00000486995 ABCB11O95342 1321 aa13.71□□□□□ -0.21
PTCD2-204ENST00000486995 H3BQF6 201 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 ERLIN1O75477 346 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.22
PTCD2-204ENST00000486995 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.22
PTCD2-204ENST00000486995 PSMD2Q13200 908 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 LRRC41Q15345 812 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 DOK7Q18PE1 504 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 C10orf71Q711Q0 1435 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 HDXQ7Z353 690 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 CCDC42Q96M95 316 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 MMS19Q96T76 1030 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.22
PTCD2-204ENST00000486995 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.22
PTCD2-204ENST00000486995 MPHOSPH10O00566 681 aaKnown RBP13.7□□□□□ -0.22
PTCD2-204ENST00000486995 VAV2P52735 878 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 NFIAQ12857 509 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 KRT26Q7Z3Y9 468 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 FAM207AQ9NSI2 230 aaPredicted RBP13.7□□□□□ -0.22
PTCD2-204ENST00000486995 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
PTCD2-204ENST00000486995 TUBBP07437 444 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 ATP2B2Q01814 1243 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 WDR93Q6P2C0 686 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 HHIPL2Q6UWX4 724 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 ZFPM1Q8IX07 1006 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 MSL3Q8N5Y2 521 aaKnown RBP13.7□□□□□ -0.22
PTCD2-204ENST00000486995 PCDHA12Q9UN75 941 aa13.7□□□□□ -0.22
PTCD2-204ENST00000486995 AFF2P51816 1311 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 HOXA7P31268 230 aaPredicted RBP13.69□□□□□ -0.22
PTCD2-204ENST00000486995 HYIQ5T013 277 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 FOXR2Q6PJQ5 311 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 CCDC84Q86UT8 332 aaPredicted RBP13.69□□□□□ -0.22
PTCD2-204ENST00000486995 C2CD5Q86YS7 1000 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 MACROD2A1Z1Q3 448 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 HLA-DOAP06340 250 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
PTCD2-204ENST00000486995 USP14P54578 494 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 KIF5AQ12840 1032 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 COASYQ13057 564 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 ZCWPW2Q504Y3 356 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 MEX3CQ5U5Q3 659 aaKnown RBP13.69□□□□□ -0.22
PTCD2-204ENST00000486995 DNAJC18Q9H819 358 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 PDE11AQ9HCR9 933 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 QSER1Q2KHR3 1735 aa13.69□□□□□ -0.22
PTCD2-204ENST00000486995 ANO9A1A5B4 782 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 ERCC3P19447 782 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 SPA17Q15506 151 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 MYOCDQ8IZQ8 938 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 BAP1Q92560 729 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 TEKT1Q969V4 418 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 LCA5LO95447 670 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 SEPT2Q15019 361 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 PROM2Q8N271 834 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 SECISBP2LQ93073 1101 aaKnown RBP13.68□□□□□ -0.22
PTCD2-204ENST00000486995 CAPZA3Q96KX2 299 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 TSGA10Q9BZW7 698 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 GBP3Q9H0R5 595 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 EHD4Q9H223 541 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 PANK4Q9NVE7 773 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 PCDHA13Q9Y5I0 950 aa13.68□□□□□ -0.22
PTCD2-204ENST00000486995 LRRC53A6NM62 1247 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 E9PMD0 336 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 ZNF185O15231 689 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 MARCH6O60337 910 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 EIF4A3P38919 411 aaKnown RBP13.67□□□□□ -0.22
PTCD2-204ENST00000486995 SHROOM1Q2M3G4 852 aaPredicted RBP13.67□□□□□ -0.22
PTCD2-204ENST00000486995 QRICH1Q2TAL8 776 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 RRAGAQ7L523 313 aa13.67□□□□□ -0.22
PTCD2-204ENST00000486995 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms