RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 RIC1Q4ADV7 1423 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 PALMO75781 387 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 ANP32DO95626 131 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 MYBP10242 640 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 CCNE1P24864 410 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 BIRC3Q13489 604 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 ASTE1Q2TB18 679 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 BZW1Q7L1Q6 419 aaKnown RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 ARMC9Q7Z3E5 817 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 DDX42Q86XP3 938 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 RNF10Q8N5U6 811 aaKnown RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 RBM33Q96EV2 1170 aaKnown RBP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 FAM89AQ96GI7 184 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC171-208ENST00000486641 SIK3Q9Y2K2 1263 aa11.74□□□□□ -0.53
CCDC171-208ENST00000486641 TNKSO95271 1327 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 GRID2IPA4D2P6 1211 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 CCT8L1PA6NM43 557 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 TRIM37O94972 964 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 MAP2K1Q02750 393 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-208ENST00000486641 KCTD19Q17RG1 926 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-208ENST00000486641 CDCA2Q69YH5 1023 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-208ENST00000486641 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 LDHAL6AQ6ZMR3 332 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 RUFY4Q6ZNE9 571 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 TTLL11Q8NHH1 800 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 TCP11Q8WWU5 503 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 MMRN2Q9H8L6 949 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 TRPC6Q9Y210 931 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 C15orf41Q9Y2V0 281 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 TIAM2Q8IVF5 1701 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 KIF1AQ12756 1690 aa11.73□□□□□ -0.53
CCDC171-208ENST00000486641 CLTAP09496 248 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 FLT3P36888 993 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 MAGOHP61326 146 aaKnown RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 PPP2R5BQ15173 497 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 AGBL2Q5U5Z8 902 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 LRRC15Q8TF66 581 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 MAGOHBQ96A72 148 aaKnown RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 MTA3Q9BTC8 594 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 NEUROG2Q9H2A3 272 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 LRRC4CQ9HCJ2 640 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 SLC39A2Q9NP94 309 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 BICDL2A1A5D9 508 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 SMIM22K7EJ46 135 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 CSF1RP07333 972 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 CDC25CP30307 473 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 PEX19P40855 299 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 CEBPAP49715 358 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 CABP4P57796 275 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 EHHADHQ08426 723 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 SF3A3Q12874 501 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 STK4Q13043 487 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 MEI1Q5TIA1 1274 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 ARL6IP4Q66PJ3 421 aaKnown RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 CRELD2Q6UXH1 353 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 MDM1Q8TC05 714 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 UBLCP1Q8WVY7 318 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 DCAF5Q96JK2 942 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 SPATS2LQ9NUQ6 558 aaKnown RBP11.72□□□□□ -0.53
CCDC171-208ENST00000486641 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 NLRP2Q9NX02 1062 aa11.72□□□□□ -0.53
CCDC171-208ENST00000486641 KLHL33A6NCF5 533 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 CYP27B1O15528 508 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
CCDC171-208ENST00000486641 TRAPPC10P48553 1259 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 NLRP5P59047 1200 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 VWA3BQ502W6 1294 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.53
CCDC171-208ENST00000486641 SYNE4Q8N205 404 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 CCDC63Q8NA47 563 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 BAP1Q92560 729 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 LRRC45Q96CN5 670 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 IQCDQ96DY2 449 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 SPAG5Q96R06 1193 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 ISCA1Q9BUE6 129 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 PANK4Q9NVE7 773 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 RTL9Q8NET4 1388 aa11.71□□□□□ -0.53
CCDC171-208ENST00000486641 FCER1AP12319 257 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 ARID4AP29374 1257 aaPredicted RBP11.71□□□□□ -0.54
CCDC171-208ENST00000486641 TNNC1P63316 161 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 PDE4DQ08499 809 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 RIPK1Q13546 671 aa11.71□□□□□ -0.54
CCDC171-208ENST00000486641 HGSNATQ68CP4 663 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms