RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
CCHCR1-214ENST00000486060 FAM126BQ8IXS8 530 aa19.22■□□□□ 0.67
CCHCR1-214ENST00000486060 GPKOWQ92917 476 aaPredicted RBP eCLIP19.22■□□□□ 0.67
CCHCR1-214ENST00000486060 BADQ92934 168 aa19.22■□□□□ 0.67
CCHCR1-214ENST00000486060 VTI1AQ96AJ9 217 aa19.22■□□□□ 0.67
CCHCR1-214ENST00000486060 UBE2OQ9C0C9 1292 aaKnown RBP19.22■□□□□ 0.67
CCHCR1-214ENST00000486060 A6NJR5 290 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 EPB41L2O43491 1005 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 MYCLP12524 364 aaPredicted RBP19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 MRPS9P82933 396 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 PURAQ00577 322 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 ITGA7Q13683 1181 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 TYW1BQ6NUM6 668 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 SYNE3Q6ZMZ3 975 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 FBXL16Q8N461 479 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 PPP1R13LQ8WUF5 828 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 BRF1Q92994 677 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 SEC63Q9UGP8 760 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 TBX21Q9UL17 535 aa19.21■□□□□ 0.67
CCHCR1-214ENST00000486060 NID2Q14112 1375 aa19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 GOLGA8AA7E2F4 631 aa19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 GOLGA8BA8MQT2 603 aa19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 PIK3CDO00329 1044 aa19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 CABYRO75952 493 aa19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 CD4P01730 458 aa19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 CASTP20810 708 aaKnown RBP19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 RBM28Q9NW13 759 aaKnown RBP19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 PRKAG2Q9UGJ0 569 aa19.2■□□□□ 0.66
CCHCR1-214ENST00000486060 DCDC2CA8MYV0 355 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 ZEB2O60315 1214 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 MYL3P08590 195 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 ADD1P35611 737 aaKnown RBP19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 CPT1AP50416 773 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 EPHB4P54760 987 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 SP2Q02086 613 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 WWC2Q6AWC2 1192 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 TDHQ8IZJ6 230 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 AFG1LQ8WV93 481 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 LBHD1Q9BQE6 289 aaPredicted RBP19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 BCAS3Q9H6U6 928 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 ZSWIM6Q9HCJ5 1215 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 TMEM39AQ9NV64 488 aa19.19■□□□□ 0.66
CCHCR1-214ENST00000486060 GH1P01241 217 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 RCAN1P53805 252 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 SEMA3FQ13275 785 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 TOB2Q14106 344 aaPredicted RBP19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 UBE2SQ16763 222 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 LRCH3Q96II8 777 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 POLR3EQ9NVU0 708 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 V9GY48 417 aaPredicted RBP19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 MROH7Q68CQ1 1323 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 TANC1Q9C0D5 1861 aa19.18■□□□□ 0.66
CCHCR1-214ENST00000486060 MMP3P08254 477 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 CCND2P30279 289 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 EVCP57679 992 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 C9orf50Q5SZB4 431 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 RUFY3Q7L099 469 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 HEATR3Q7Z4Q2 680 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 TET1Q8NFU7 2136 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 SMARCC2Q8TAQ2 1214 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 TRPV6Q9H1D0 765 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 PSTPIP2Q9H939 334 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 NAP1L2Q9ULW6 460 aaPredicted RBP19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 MRVI1Q9Y6F6 885 aa19.17■□□□□ 0.66
CCHCR1-214ENST00000486060 GBF1Q92538 1859 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 WDR81Q562E7 1941 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 STXBP3O00186 592 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 ADAMTS3O15072 1205 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 SORBS3O60504 671 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 B4GALT4O60513 344 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 PSMA5P28066 241 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 METAP2P50579 478 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 FGD1P98174 961 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 SHHQ15465 462 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 NBPF20Q3BBV1 942 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 KAT2BQ92831 832 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 EMID1Q96A84 441 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 MTG1Q9BT17 334 aaPredicted RBP19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 UPF3BQ9BZI7 483 aaKnown RBP19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 KAT6AQ92794 2004 aa19.16■□□□□ 0.66
CCHCR1-214ENST00000486060 TIMP1P01033 207 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 RAG1P15918 1043 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 UBA1P22314 1058 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 NTRK3Q16288 839 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 MYSM1Q5VVJ2 828 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 INPP4AQ96PE3 977 aaPredicted RBP19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 LARP6Q9BRS8 491 aaKnown RBP19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 TM6SF1Q9BZW5 370 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 ALDH8A1Q9H2A2 487 aaPredicted RBP19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 RTEL1Q9NZ71 1219 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 TELO2Q9Y4R8 837 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 UMODL1Q5DID0 1318 aa19.15■□□□□ 0.66
CCHCR1-214ENST00000486060 SEC24BO95487 1268 aa19.14■□□□□ 0.65
CCHCR1-214ENST00000486060 PDIA3P30101 505 aaKnown RBP19.14■□□□□ 0.65
CCHCR1-214ENST00000486060 ICAM3P32942 547 aa19.14■□□□□ 0.65
CCHCR1-214ENST00000486060 PKN1Q16512 942 aa19.14■□□□□ 0.65
CCHCR1-214ENST00000486060 HSDL1Q3SXM5 330 aa19.14■□□□□ 0.65
CCHCR1-214ENST00000486060 LRIT3Q3SXY7 679 aa19.14■□□□□ 0.65
CCHCR1-214ENST00000486060 CELF3Q5SZQ8 465 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms