RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 CSPG5O95196 566 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 PDGFBP01127 241 aaPredicted RBP11.65□□□□□ -0.54
SND1-213ENST00000486037 AVPR2P30518 371 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 ID4P47928 161 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 PTPN11Q06124 597 aaPredicted RBP11.65□□□□□ -0.54
SND1-213ENST00000486037 ANKRD45Q5TZF3 282 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 AACSQ86V21 672 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 MYOCDQ8IZQ8 938 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 DNAJC2Q99543 621 aaKnown RBP11.65□□□□□ -0.54
SND1-213ENST00000486037 POP1Q99575 1024 aaKnown RBP11.65□□□□□ -0.54
SND1-213ENST00000486037 FSD1Q9BTV5 496 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 LNPKQ9C0E8 428 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 EXOC6BQ9Y2D4 811 aa11.65□□□□□ -0.54
SND1-213ENST00000486037 EPG5Q9HCE0 2579 aa11.65□□□□□ -0.55
SND1-213ENST00000486037 KMT2BQ9UMN6 2715 aaPredicted RBP11.64□□□□□ -0.55
SND1-213ENST00000486037 A6NJR5 290 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 SMARCA5O60264 1052 aaPredicted RBP11.64□□□□□ -0.55
SND1-213ENST00000486037 ARIH2O95376 493 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 ADD2P35612 726 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 ALDH5A1P51649 535 aaPredicted RBP11.64□□□□□ -0.55
SND1-213ENST00000486037 RBL2Q08999 1139 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 SMAD4Q13485 552 aaKnown RBP11.64□□□□□ -0.55
SND1-213ENST00000486037 IKBKEQ14164 716 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 TRIM71Q2Q1W2 868 aaKnown RBP11.64□□□□□ -0.55
SND1-213ENST00000486037 NSMFQ6X4W1 530 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 TMEM192Q8IY95 271 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 KAT2BQ92831 832 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 CEP95Q96GE4 821 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 OSBPL7Q9BZF2 842 aa11.64□□□□□ -0.55
SND1-213ENST00000486037 CACNA1GO43497 2377 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 LOC730098B7Z3J9 87 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 BMP3P12645 472 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 TTF1Q15361 905 aaPredicted RBP11.63□□□□□ -0.55
SND1-213ENST00000486037 PKN1Q16512 942 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 ZNF618Q5T7W0 954 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 FBXO11Q86XK2 927 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 MKL1Q969V6 931 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 IGFLR1Q9H665 355 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 SLC4A4Q9Y6R1 1079 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
SND1-213ENST00000486037 FRYLO94915 3013 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 GRM6O15303 877 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 PRDM1O75626 825 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 LINC00271P0C7V0 271 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 ZNF200P98182 395 aaPredicted RBP11.62□□□□□ -0.55
SND1-213ENST00000486037 SIGLEC14Q08ET2 396 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 BAATQ14032 418 aaPredicted RBP11.62□□□□□ -0.55
SND1-213ENST00000486037 HIC1Q14526 733 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 TKFCQ3LXA3 575 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 SESTD1Q86VW0 696 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 GMCL1P1Q8NEA9 526 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 DBF4BQ8NFT6 615 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 MSLNLQ96KJ4 702 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 MTMR4Q9NYA4 1195 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 CD207Q9UJ71 328 aa11.62□□□□□ -0.55
SND1-213ENST00000486037 NFIBO00712 420 aa11.61□□□□□ -0.55
SND1-213ENST00000486037 STAT2P52630 851 aa11.61□□□□□ -0.55
SND1-213ENST00000486037 CBX2Q14781 532 aaPredicted RBP11.61□□□□□ -0.55
SND1-213ENST00000486037 PPP2R5BQ15173 497 aa11.61□□□□□ -0.55
SND1-213ENST00000486037 SLC30A10Q6XR72 485 aa11.61□□□□□ -0.55
SND1-213ENST00000486037 AMOTL1Q8IY63 956 aa11.61□□□□□ -0.55
SND1-213ENST00000486037 SAMD11Q96NU1 681 aa11.61□□□□□ -0.55
SND1-213ENST00000486037 PUS7LQ9H0K6 701 aaKnown RBP11.61□□□□□ -0.55
SND1-213ENST00000486037 HDAC6Q9UBN7 1215 aa11.61□□□□□ -0.55
SND1-213ENST00000486037 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
SND1-213ENST00000486037 RALGAPA2Q2PPJ7 1873 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 KPNA6O60684 536 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 EFCAB14O75071 495 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 RAB11FIP3O75154 756 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 KDM4AO75164 1064 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 UPP2O95045 317 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 EYA4O95677 639 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 AMHP03971 560 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 MCCP23508 829 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 NBL1P41271 181 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 KCTD1Q719H9 257 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 FRMD5Q7Z6J6 570 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 OTUD7AQ8TE49 926 aaPredicted RBP11.6□□□□□ -0.55
SND1-213ENST00000486037 AFG1LQ8WV93 481 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 STAG1Q8WVM7 1258 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 YME1L1Q96TA2 773 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 MKNK2Q9HBH9 465 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 CLEC1BQ9P126 229 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 GTF2IRD1Q9UHL9 959 aa11.6□□□□□ -0.55
SND1-213ENST00000486037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.59□□□□□ -0.55
SND1-213ENST00000486037 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
SND1-213ENST00000486037 PARNO95453 639 aaKnown RBP11.59□□□□□ -0.55
SND1-213ENST00000486037 MMP3P08254 477 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 FDX1P10109 184 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 ARP10275 920 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 CTNNB1P35222 781 aa11.59□□□□□ -0.55
SND1-213ENST00000486037 IKQ13123 557 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms