RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 DUSP4Q13115 394 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 DHCR24Q15392 516 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 CXorf57Q6NSI4 855 aaKnown RBP5.64□□□□□ -1.51
PTCD3-214ENST00000483925 KIAA1211LQ6NV74 962 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 STRA8Q7Z7C7 330 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 SPATS2Q86XZ4 545 aaKnown RBP5.64□□□□□ -1.51
PTCD3-214ENST00000483925 MAGEB6Q8N7X4 407 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 ANKS4BQ8N8V4 417 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 EXOC2Q96KP1 924 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 CASS4Q9NQ75 786 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 GPR160Q9UJ42 338 aa5.64□□□□□ -1.51
PTCD3-214ENST00000483925 FBXO9Q9UK97 447 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-214ENST00000483925 POLR3KQ9Y2Y1 108 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-214ENST00000483925 TRBV23-1A0A0A0MS06 115 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 TEX51A0A1B0GUA7 166 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 NBPF7P0C2Y1 421 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-214ENST00000483925 HOXA5P20719 270 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 ZNF143P52747 638 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-214ENST00000483925 SLC7A5Q01650 507 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 TEKQ02763 1124 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 PICALMQ13492 652 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 HSP90AA2PQ14568 343 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-214ENST00000483925 CLEC16AQ2KHT3 1053 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 GRAMD1BQ3KR37 738 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 UNC5AQ6ZN44 842 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 TMTC2Q8N394 836 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 E2F7Q96AV8 911 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 CCDC74BQ96LY2 380 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 KREMEN1Q96MU8 473 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 CLUHP3Q96NS8 147 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 YIPF4Q9BSR8 244 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 ASPNQ9BXN1 380 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 RTFDC1Q9BY42 306 aaPredicted RBP5.63□□□□□ -1.51
PTCD3-214ENST00000483925 PARD6AQ9NPB6 346 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 PRDM11Q9NQV5 511 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 INTUQ9ULD6 942 aa5.63□□□□□ -1.51
PTCD3-214ENST00000483925 CNOT6Q9ULM6 557 aaKnown RBP5.63□□□□□ -1.51
PTCD3-214ENST00000483925 NOB1Q9ULX3 412 aaKnown RBP5.63□□□□□ -1.51
PTCD3-214ENST00000483925 PSPNO60542 156 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 TRIM27P14373 513 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 ZSCAN20P17040 1043 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-214ENST00000483925 SDSP20132 328 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 POU3F2P20265 443 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-214ENST00000483925 STAT4Q14765 748 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 TMEM95Q3KNT9 176 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 ZNF385BQ569K4 471 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 FAM209AQ5JX71 171 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 FOXB2Q5VYV0 432 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 KRBA2Q6ZNG9 492 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 PCGF5Q86SE9 256 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 AMOTL1Q8IY63 956 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 LINC01599Q8WXQ3 324 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 TTC1Q99614 292 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 ANTXR1Q9H6X2 564 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 REV1Q9UBZ9 1251 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 EBF1Q9UH73 591 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 USP25Q9UHP3 1055 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 PRR36Q9H6K5 1346 aa5.62□□□□□ -1.51
PTCD3-214ENST00000483925 SHISA3A0PJX4 238 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 CHURC1-FNTBB4DL54 471 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 TBX3O15119 743 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 HTR3BO95264 441 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 F2P00734 622 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 CT47B1P0C2W7 299 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 BMP7P18075 431 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 BDNFP23560 247 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 MAN1A1P33908 653 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 FLT3P36888 993 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 NEK4P51957 841 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 SUMO1P63165 101 aaKnown RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 BBS9Q3SYG4 887 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 SV2CQ496J9 727 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 INO80DQ53TQ3 878 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 ACBD5Q5T8D3 534 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 JPH3Q8WXH2 748 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 USP7Q93009 1102 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 SHISA4Q96DD7 197 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 PLCD4Q9BRC7 762 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 AARSD1Q9BTE6 412 aaKnown RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 SGPP1Q9BX95 441 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 ASCC2Q9H1I8 757 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 ZCCHC4Q9H5U6 513 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 GCM1Q9NP62 436 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 LUC7LQ9NQ29 371 aaKnown RBP5.61□□□□□ -1.51
PTCD3-214ENST00000483925 LTBP3Q9NS15 1303 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 OBP2AQ9NY56 170 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 GMIPQ9P107 970 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 KLHL3Q9UH77 587 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 ZNF281Q9Y2X9 895 aa5.61□□□□□ -1.51
PTCD3-214ENST00000483925 A0A1W2PQU0 124 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 OR14I1A6ND48 311 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 RFXAPO00287 272 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 ZEB2O60315 1214 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 EFCAB14O75071 495 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 ABLIM3O94929 683 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 FBXO21O94952 628 aa5.6□□□□□ -1.51
PTCD3-214ENST00000483925 NME1P15531 152 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms