RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
UBR4-213ENST00000483922 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
UBR4-213ENST00000483922 SYTL5Q8TDW5 730 aaPredicted RBP15.16■□□□□ 0.02
UBR4-213ENST00000483922 A0A0D9SFI3 127 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 HAS3O00219 553 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 MX1P20591 662 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 HAND2P61296 217 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 BRDTQ58F21 947 aaPredicted RBP15.15■□□□□ 0.02
UBR4-213ENST00000483922 CNKSR3Q6P9H4 555 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 CHST3Q7LGC8 479 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 TBC1D10CQ8IV04 446 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 FAM178BQ8IXR5 827 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 TTC14Q96N46 770 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 RAD9AQ99638 391 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 UBE2ZQ9H832 354 aaPredicted RBP15.15■□□□□ 0.02
UBR4-213ENST00000483922 TOMM22Q9NS69 142 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 GTF2IRD1Q9UHL9 959 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 DDX41Q9UJV9 622 aaKnown RBP15.15■□□□□ 0.02
UBR4-213ENST00000483922 NOD1Q9Y239 953 aa15.15■□□□□ 0.02
UBR4-213ENST00000483922 HSPD1P10809 573 aaKnown RBP15.14■□□□□ 0.01
UBR4-213ENST00000483922 IL9P15248 144 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 KCNJ6P48051 423 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 ZNF618Q5T7W0 954 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 FAM117BQ6P1L5 589 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 ZKSCAN3Q9BRR0 538 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 ZBED2Q9BTP6 218 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 HELLSQ9NRZ9 838 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 TRIOO75962 3097 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 RAD50Q92878 1312 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 C5orf42Q9H799 3197 aa15.14■□□□□ 0.01
UBR4-213ENST00000483922 OPLAHO14841 1288 aa15.13■□□□□ 0.01
UBR4-213ENST00000483922 RGS20O76081 388 aa15.13■□□□□ 0.01
UBR4-213ENST00000483922 GH1P01241 217 aa15.13■□□□□ 0.01
UBR4-213ENST00000483922 PSEN2P49810 448 aa15.13■□□□□ 0.01
UBR4-213ENST00000483922 LEXMQ3ZCV2 418 aa15.13■□□□□ 0.01
UBR4-213ENST00000483922 TGS1Q96RS0 853 aaKnown RBP15.13■□□□□ 0.01
UBR4-213ENST00000483922 ALG1Q9BT22 464 aa15.13■□□□□ 0.01
UBR4-213ENST00000483922 HCN4Q9Y3Q4 1203 aa15.13■□□□□ 0.01
UBR4-213ENST00000483922 ABHD14A-ACY1A0A1B0GW23 586 aa15.12■□□□□ 0.01
UBR4-213ENST00000483922 CASTP20810 708 aaKnown RBP15.12■□□□□ 0.01
UBR4-213ENST00000483922 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
UBR4-213ENST00000483922 ADGRF4Q8IZF3 695 aa15.12■□□□□ 0.01
UBR4-213ENST00000483922 EMID1Q96A84 441 aaPredicted RBP15.12■□□□□ 0.01
UBR4-213ENST00000483922 EVI5LQ96CN4 794 aa15.12■□□□□ 0.01
UBR4-213ENST00000483922 BCAS3Q9H6U6 928 aa15.12■□□□□ 0.01
UBR4-213ENST00000483922 NEDD4P46934 1319 aa15.12■□□□□ 0.01
UBR4-213ENST00000483922 MUC6Q6W4X9 2439 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 F2P00734 622 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 KCNA5P22460 613 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 SP2Q02086 613 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 NMIQ13287 307 aaPredicted RBP15.11■□□□□ 0.01
UBR4-213ENST00000483922 PTK7Q13308 1070 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 MFSD10Q14728 455 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 CDC37Q16543 378 aaPredicted RBP15.11■□□□□ 0.01
UBR4-213ENST00000483922 KIAA0753Q2KHM9 967 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 GJD3Q8N144 294 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 DBF4BQ8NFT6 615 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 NSUN6Q8TEA1 469 aaKnown RBP15.11■□□□□ 0.01
UBR4-213ENST00000483922 RMDN3Q96TC7 470 aa15.11■□□□□ 0.01
UBR4-213ENST00000483922 KIAA1217Q5T5P2 1943 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 GRXCR2A6NFK2 248 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 LGR5O75473 907 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 HOXD8P13378 290 aaPredicted RBP15.1■□□□□ 0.01
UBR4-213ENST00000483922 PDE1AP54750 535 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 HTRA4P83105 476 aaPredicted RBP15.1■□□□□ 0.01
UBR4-213ENST00000483922 IKBKEQ14164 716 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 STXBP2Q15833 593 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 DGKDQ16760 1214 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 HSDL1Q3SXM5 330 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
UBR4-213ENST00000483922 ALYREFQ86V81 257 aaKnown RBP15.1■□□□□ 0.01
UBR4-213ENST00000483922 CCDC155Q8N6L0 562 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 C7orf31Q8N865 590 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 NEK9Q8TD19 979 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
UBR4-213ENST00000483922 ANKS1AQ92625 1134 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 IWS1Q96ST2 819 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
UBR4-213ENST00000483922 JMJD4Q9H9V9 463 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 PNMA2Q9UL42 364 aa15.1■□□□□ 0.01
UBR4-213ENST00000483922 PIEZO1Q92508 2521 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 SIP14410 1827 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 PRR33A8MZF0 331 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 SORBS3O60504 671 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 EIF3JO75822 258 aaKnown RBP15.09■□□□□ 0.01
UBR4-213ENST00000483922 PARNO95453 639 aaKnown RBP15.09■□□□□ 0.01
UBR4-213ENST00000483922 NR3C2P08235 984 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 EIF2AK2P19525 551 aaKnown RBP15.09■□□□□ 0.01
UBR4-213ENST00000483922 QRICH1Q2TAL8 776 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 GPATCH4Q5T3I0 446 aaKnown RBP15.09■□□□□ 0.01
UBR4-213ENST00000483922 ANKRD45Q5TZF3 282 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 MYSM1Q5VVJ2 828 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 MFSD6Q6ZSS7 791 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 DGKHQ86XP1 1220 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 GPKOWQ92917 476 aaPredicted RBP eCLIP15.09■□□□□ 0.01
UBR4-213ENST00000483922 ZFP91Q96JP5 570 aaPredicted RBP15.09■□□□□ 0.01
UBR4-213ENST00000483922 C16orf70Q9BSU1 422 aa15.09■□□□□ 0.01
UBR4-213ENST00000483922 ABCB11O95342 1321 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms