RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SLC4A1P02730 911 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 VCAM1P19320 739 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 LSP1P33241 339 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 DR1Q01658 176 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 AP1M1Q9BXS5 423 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 PDXDC1Q6P996 788 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 AZI2Q9H6S1 392 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 NSFL1CQ9UNZ2 370 aaKnown RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 SGK1O00141 431 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 HAUS5O94927 633 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 MT-ND3P03897 115 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 CDH24Q86UP0 819 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 DKK3Q9UBP4 350 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 PCDHA7Q9UN72 937 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 MAPKBP1O60336 1514 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 NAIPQ13075 1403 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 FAM83GA6ND36 823 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 CTIFO43310 598 aaKnown RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 VCPP55072 806 aaKnown RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 HEATR4Q86WZ0 1026 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 RNF217Q8TC41 542 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 ASZ1Q8WWH4 475 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 SGSM3Q96HU1 749 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 NHEJ1Q9H9Q4 299 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 TLK1Q9UKI8 766 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 RSPH10B2B2RC85 870 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 FTCDO95954 541 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 RSPH10BP0C881 870 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 GSPT1P15170 499 aaKnown RBP11.07□□□□□ -0.64
COL12A1-207ENST00000483888 POLR2FP61218 127 aaKnown RBP11.07□□□□□ -0.64
COL12A1-207ENST00000483888 RNF207Q6ZRF8 634 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 PACS2Q86VP3 889 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 C9orf84Q5VXU9 1444 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
COL12A1-207ENST00000483888 DISP3Q9P2K9 1392 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 PPP1R37O75864 691 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 CMA1P23946 247 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 S100A5P33763 92 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 TNNI2P48788 182 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 BTKQ06187 659 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 FNBP1Q96RU3 617 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 UNC45AQ9H3U1 944 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 IL1RAPL1Q9NZN1 696 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 B4DLN1 442 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 MAFGO15525 162 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 SGSM2O43147 1006 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 SEC24DO94855 1032 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-207ENST00000483888 DLGAP3O95886 979 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 NPR1P16066 1061 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 PGM1P36871 562 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 DEFA1P59665 94 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 DEFA3P59666 94 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 ZCWPW2Q504Y3 356 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 WDR47O94967 919 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 TRPM8Q7Z2W7 1104 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 PLD3Q8IV08 490 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 MIEF2Q96C03 454 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 SNX25Q9H3E2 840 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 HECW1Q76N89 1606 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 KITP10721 976 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 RASA4BC9J798 803 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 RASA4O43374 803 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 ECEL1O95672 775 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 GRK2P25098 689 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 HSPA9P38646 679 aaKnown RBP11.07□□□□□ -0.64
COL12A1-207ENST00000483888 EPHB1P54762 984 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 STX3Q13277 289 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 RINT1Q6NUQ1 792 aa11.07□□□□□ -0.64
COL12A1-207ENST00000483888 FAM43BQ6ZT52 329 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-207ENST00000483888 RNF103-CHMP3A0A140T963 221 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 GCNT3O95395 438 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 HLA-DPA1P20036 260 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 BTN2A1Q7KYR7 527 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 DYMQ7RTS9 669 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 LBHD1Q9BQE6 289 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 PCDHA13Q9Y5I0 950 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 TMEM191CA6NGB0 347 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 TMEM191BP0C7N4 346 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 XRCC5P13010 732 aaKnown RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 SGO2Q562F6 1265 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 CDKL2Q92772 493 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 CDR2LQ86X02 465 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 PARP3Q9Y6F1 533 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 CD2BP2O95400 341 aaKnown RBP11.06□□□□□ -0.64
COL12A1-207ENST00000483888 NFRKBQ6P4R8 1299 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 FAM81AQ8TBF8 368 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 VIPAS39Q9H9C1 493 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 SYBUQ9NX95 663 aa11.06□□□□□ -0.64
COL12A1-207ENST00000483888 ANGEL1Q9UNK9 670 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms