RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 MINPP1Q9UNW1 487 aa5.06□□□□□ -1.6
LRCH3-217ENST00000483442 BTAF1O14981 1849 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 TMEM82A0PJX8 343 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 SLC22A31A6NKX4 558 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 B8ZZF3 427 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 FOXN1O15353 648 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 USP2O75604 605 aaPredicted RBP5.05□□□□□ -1.6
LRCH3-217ENST00000483442 MMP10P09238 476 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 DPEP1P16444 411 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 SDHBP21912 280 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 POLR2BP30876 1174 aaKnown RBP5.05□□□□□ -1.6
LRCH3-217ENST00000483442 PDE6BP35913 854 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 TGFB2P61812 414 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 SSPNQ14714 243 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 KIR3DS1Q14943 382 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 FBXL19Q6PCT2 694 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 NLRX1Q86UT6 975 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 PHACTR4Q8IZ21 702 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 PANK1Q8TE04 598 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 DHX38Q92620 1227 aaKnown RBP5.05□□□□□ -1.6
LRCH3-217ENST00000483442 CRELD1Q96HD1 420 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 FOXP3Q9BZS1 431 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 RNF181Q9P0P0 153 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 COL18A1P39060 1754 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 NHSQ6T4R5 1651 aa5.05□□□□□ -1.6
LRCH3-217ENST00000483442 ANKRD36BQ8N2N9 1353 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 CENPJQ9HC77 1338 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-217ENST00000483442 TEX51A0A1B0GUA7 166 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 RGS13O14921 159 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 PEX10O60683 326 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 VEGFAP15692 232 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-217ENST00000483442 HMGB2P26583 209 aaKnown RBP5.04□□□□□ -1.6
LRCH3-217ENST00000483442 RPL10P27635 214 aaKnown RBP5.04□□□□□ -1.6
LRCH3-217ENST00000483442 NMIQ13287 307 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-217ENST00000483442 MPP2Q14168 576 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 ARSHQ5FYA8 562 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 SNAP47Q5SQN1 464 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 NME9Q86XW9 330 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 RELL1Q8IUW5 271 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 ANKS4BQ8N8V4 417 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 TCTN2Q96GX1 697 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 KBTBD4Q9NVX7 518 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 RAPGEFL1Q9UHV5 662 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 RGPD5Q99666 1765 aa5.04□□□□□ -1.6
LRCH3-217ENST00000483442 ITSN1Q15811 1721 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 COL24A1Q17RW2 1714 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 WDR90Q96KV7 1748 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 SLIT3O75094 1523 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 TTC21AQ8NDW8 1320 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 A0A0G2JLL6 359 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-217ENST00000483442 CCDC85CA6NKD9 419 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 SORBS3O60504 671 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 BMP7P18075 431 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 KCNA3P22001 575 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 FBLN1P23142 703 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 GBP1P32455 592 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 CRKP46108 304 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 LBX1P52954 281 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 SNX17Q15036 470 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 CLEC16AQ2KHT3 1053 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 BBS9Q3SYG4 887 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 SPPL2CQ8IUH8 684 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 AEBP1Q8IUX7 1158 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 IP6K1Q92551 441 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 ABHD8Q96I13 439 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 HHIPL1Q96JK4 782 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 PLCD4Q9BRC7 762 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 BRMS1Q9HCU9 246 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 MBD1Q9UIS9 605 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-217ENST00000483442 PCNTO95613 3336 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 ARHGEF28Q8N1W1 1705 aaKnown RBP5.03□□□□□ -1.6
LRCH3-217ENST00000483442 NSD2O96028 1365 aa5.03□□□□□ -1.6
LRCH3-217ENST00000483442 KCPQ6ZWJ8 1503 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 EVC2Q86UK5 1308 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 GREM1O60565 184 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 TRIM13O60858 407 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 FKTNO75072 461 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 SEMA7AO75326 666 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 CTCFP49711 727 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 EPHB3P54753 998 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 CTSWP56202 376 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 TMF1P82094 1093 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 CHRNEQ04844 493 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 TRIM26Q12899 539 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 DUSP4Q13115 394 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 NBPF9Q3BBW0 867 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 DALRD3Q5D0E6 543 aaKnown RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 ADGRF1Q5T601 910 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 NBPF12Q5TAG4 269 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 ERMP1Q7Z2K6 904 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 NLGN1Q8N2Q7 840 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 SYTL5Q8TDW5 730 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 ZNF512BQ96KM6 892 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 EPB41L4AQ9HCS5 686 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 PARD6AQ9NPB6 346 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 VTI1BQ9UEU0 232 aa5.02□□□□□ -1.61
LRCH3-217ENST00000483442 CNOT6Q9ULM6 557 aaKnown RBP5.02□□□□□ -1.61
LRCH3-217ENST00000483442 KCTD3Q9Y597 815 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms