RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SLC4A4Q9Y6R1 1079 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 SPATA31A1Q5TZJ5 1347 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 F8W031 263 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-205ENST00000483122 ADAMTS3O15072 1205 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 PRKAB2O43741 272 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 LCA5LO95447 670 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 GHRP10912 638 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 XBP1P17861 261 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 DRD4P21917 467 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 STAT6P42226 847 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 PPP2R2AP63151 447 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 KCNB1Q14721 858 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 ODF2Q5BJF6 829 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
VTI1A-205ENST00000483122 CNNM2Q9H8M5 875 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 ARMT1Q9H993 441 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
VTI1A-205ENST00000483122 ERICH2A1L162 156 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 PSMA7O14818 248 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 PJA2O43164 708 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 PLEKHA8P1O95397 391 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 ECHS1P30084 290 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 HLTFQ14527 1009 aaKnown RBP eCLIP13.02□□□□□ -0.32
VTI1A-205ENST00000483122 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 GKAP1Q5VSY0 366 aaPredicted RBP13.02□□□□□ -0.32
VTI1A-205ENST00000483122 CPLX4Q7Z7G2 160 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 KLHL7Q8IXQ5 586 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.32
VTI1A-205ENST00000483122 TCP11Q8WWU5 503 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 ERGIC2Q96RQ1 377 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 PLIN2Q99541 437 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 TAF1DQ9H5J8 278 aaPredicted RBP13.02□□□□□ -0.32
VTI1A-205ENST00000483122 LRRC4CQ9HCJ2 640 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 PACSIN2Q9UNF0 486 aaPredicted RBP13.02□□□□□ -0.32
VTI1A-205ENST00000483122 NOVA2Q9UNW9 492 aaKnown RBP13.02□□□□□ -0.32
VTI1A-205ENST00000483122 TRPC6Q9Y210 931 aa13.02□□□□□ -0.32
VTI1A-205ENST00000483122 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.32
VTI1A-205ENST00000483122 IRF6O14896 467 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 MBD4O95243 580 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 ANP32DO95626 131 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 FTCDO95954 541 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 PHKG2P15735 406 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 TATP17735 454 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-205ENST00000483122 HNRNPH3P31942 346 aaKnown RBP13.02□□□□□ -0.33
VTI1A-205ENST00000483122 SLC1A4P43007 532 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 GFPT1Q06210 699 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-205ENST00000483122 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 FIGNQ5HY92 759 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 ANKRD40Q6AI12 368 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.33
VTI1A-205ENST00000483122 NOX5Q96PH1 765 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 FAM207AQ9NSI2 230 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-205ENST00000483122 C15orf41Q9Y2V0 281 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 GLI3P10071 1580 aa13.02□□□□□ -0.33
VTI1A-205ENST00000483122 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 ORC4O43929 436 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 PAEPP09466 180 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 CLTAP09496 248 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 CTNNA1P35221 906 aaKnown RBP13.01□□□□□ -0.33
VTI1A-205ENST00000483122 FUT2Q10981 343 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 PIK3AP1Q6ZUJ8 805 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 CCDC155Q8N6L0 562 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 PARD3BQ8TEW8 1205 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
VTI1A-205ENST00000483122 NEUROG2Q9H2A3 272 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 SPATS2LQ9NUQ6 558 aaKnown RBP13.01□□□□□ -0.33
VTI1A-205ENST00000483122 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.01□□□□□ -0.33
VTI1A-205ENST00000483122 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 ENO4A6NNW6 628 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 PP2D1A8MPX8 630 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 GSG1L2A8MUP6 293 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 TRIM37O94972 964 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 MYBP10242 640 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 TAX1BP1Q86VP1 789 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 GIMAP8Q8ND71 665 aaPredicted RBP13.01□□□□□ -0.33
VTI1A-205ENST00000483122 MDM1Q8TC05 714 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 ZNF570Q96NI8 536 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 PYM1Q9BRP8 204 aaKnown RBP13.01□□□□□ -0.33
VTI1A-205ENST00000483122 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
VTI1A-205ENST00000483122 PALMO75781 387 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 FLT3P36888 993 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 MAGOHP61326 146 aaKnown RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 METTL24Q5JXM2 366 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 RRAGAQ7L523 313 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 PNMA8AQ86V59 439 aaPredicted RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 ZSCAN29Q8IWY8 852 aaPredicted RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 P3H4Q92791 437 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 MAGOHBQ96A72 148 aaKnown RBP13□□□□□ -0.33
VTI1A-205ENST00000483122 ZBTB10Q96DT7 871 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 SPAG5Q96R06 1193 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 RNF14Q9UBS8 474 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
VTI1A-205ENST00000483122 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms