RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 MFSD5Q6N075 450 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 HEATR3Q7Z4Q2 680 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 RASEFQ8IZ41 740 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 CCDC82Q8N4S0 544 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 SRBD1Q8N5C6 995 aaKnown RBP18.1■□□□□ 0.49
COL16A1-212ENST00000482478 SAMD3Q8N6K7 520 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 SLC43A3Q8NBI5 491 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 TRPV6Q9H1D0 765 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 ALDH8A1Q9H2A2 487 aaPredicted RBP18.1■□□□□ 0.49
COL16A1-212ENST00000482478 TRMT13Q9NUP7 481 aaKnown RBP18.1■□□□□ 0.49
COL16A1-212ENST00000482478 NOD1Q9Y239 953 aa18.1■□□□□ 0.49
COL16A1-212ENST00000482478 GRIN2DO15399 1336 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 CNTNAP5Q8WYK1 1306 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 hCG_1642624A0A1W2PR95 340 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 A6NJR5 290 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 GOLGA8AA7E2F4 631 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 GOLGA8BA8MQT2 603 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 ZBTB43O43298 467 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 SORBS3O60504 671 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 KPNA6O60684 536 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 CD4P01730 458 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
COL16A1-212ENST00000482478 EPHB4P54760 987 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 RTN1Q16799 776 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 GPR153Q6NV75 609 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 PSRC1Q6PGN9 363 aaPredicted RBP18.09■□□□□ 0.49
COL16A1-212ENST00000482478 Q7L0L9 218 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 DHX32Q7L7V1 743 aaKnown RBP18.09■□□□□ 0.49
COL16A1-212ENST00000482478 DEFB123Q8N688 67 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 PPP1R13LQ8WUF5 828 aa18.09■□□□□ 0.49
COL16A1-212ENST00000482478 JAKMIP1Q96N16 626 aaKnown RBP18.09■□□□□ 0.49
COL16A1-212ENST00000482478 RBM28Q9NW13 759 aaKnown RBP18.09■□□□□ 0.49
COL16A1-212ENST00000482478 SCN10AQ9Y5Y9 1956 aa18.08■□□□□ 0.49
COL16A1-212ENST00000482478 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
COL16A1-212ENST00000482478 ZNF286BP0CG31 522 aa18.08■□□□□ 0.48
COL16A1-212ENST00000482478 CSF2RAP15509 400 aa18.08■□□□□ 0.48
COL16A1-212ENST00000482478 UBA1P22314 1058 aaKnown RBP18.08■□□□□ 0.48
COL16A1-212ENST00000482478 SMARCA1P28370 1054 aa18.08■□□□□ 0.48
COL16A1-212ENST00000482478 CYP2C18P33260 490 aa18.08■□□□□ 0.48
COL16A1-212ENST00000482478 GNPTABQ3T906 1256 aa18.08■□□□□ 0.48
COL16A1-212ENST00000482478 FANCBQ8NB91 859 aa18.08■□□□□ 0.48
COL16A1-212ENST00000482478 GPKOWQ92917 476 aaPredicted RBP eCLIP18.08■□□□□ 0.48
COL16A1-212ENST00000482478 ZFP91Q96JP5 570 aaPredicted RBP18.08■□□□□ 0.48
COL16A1-212ENST00000482478 FRMPD4Q14CM0 1322 aa18.07■□□□□ 0.48
COL16A1-212ENST00000482478 UMODL1Q5DID0 1318 aa18.07■□□□□ 0.48
COL16A1-212ENST00000482478 DGKDQ16760 1214 aa18.07■□□□□ 0.48
COL16A1-212ENST00000482478 NBPF20Q3BBV1 942 aa18.07■□□□□ 0.48
COL16A1-212ENST00000482478 ZNF697Q5TEC3 545 aa18.07■□□□□ 0.48
COL16A1-212ENST00000482478 DHX37Q8IY37 1157 aaKnown RBP18.07■□□□□ 0.48
COL16A1-212ENST00000482478 NOC4LQ9BVI4 516 aaKnown RBP18.07■□□□□ 0.48
COL16A1-212ENST00000482478 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
COL16A1-212ENST00000482478 TANC1Q9C0D5 1861 aa18.07■□□□□ 0.48
COL16A1-212ENST00000482478 GGPS1O95749 300 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
COL16A1-212ENST00000482478 SUPT20HL2P0C7V6 817 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 CYP2C9P11712 490 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 CPA1P15085 419 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 CASTP20810 708 aaKnown RBP18.06■□□□□ 0.48
COL16A1-212ENST00000482478 CCL23P55773 120 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 LAMC2Q13753 1193 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 NFRKBQ6P4R8 1299 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 KCNV1Q6PIU1 500 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 USP17L6PQ6QN14 398 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 PPTC7Q8NI37 304 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 EMID1Q96A84 441 aaPredicted RBP18.06■□□□□ 0.48
COL16A1-212ENST00000482478 KATNAL1Q9BW62 490 aa18.06■□□□□ 0.48
COL16A1-212ENST00000482478 SPDYE3A6NKU9 549 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 ACRP10323 421 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 HSPA4P34932 840 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 METAP2P50579 478 aaKnown RBP eCLIP18.05■□□□□ 0.48
COL16A1-212ENST00000482478 TSGA10IPQ3SY00 556 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 VSIG10LQ86VR7 867 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 FAM161BQ96MY7 647 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 SPATA33Q96N06 139 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.05■□□□□ 0.486e-7■■■■■ 29
COL16A1-212ENST00000482478 BRPF3Q9ULD4 1205 aa18.05■□□□□ 0.48
COL16A1-212ENST00000482478 PIK3CDO00329 1044 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 NOP56O00567 594 aaKnown RBP18.04■□□□□ 0.48
COL16A1-212ENST00000482478 RGS20O76081 388 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 NAPAP54920 295 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 EXOSC10Q01780 885 aaKnown RBP18.04■□□□□ 0.48
COL16A1-212ENST00000482478 UBE2SQ16763 222 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 WWC2Q6AWC2 1192 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 WNT8AQ9H1J5 351 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 MTIF3Q9H2K0 278 aaKnown RBP18.04■□□□□ 0.48
COL16A1-212ENST00000482478 PSTPIP2Q9H939 334 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 MLXIPQ9HAP2 919 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 SNX14Q9Y5W7 946 aa18.04■□□□□ 0.48
COL16A1-212ENST00000482478 FIBPO43427 364 aa18.03■□□□□ 0.48
COL16A1-212ENST00000482478 STAM2O75886 525 aa18.03■□□□□ 0.48
COL16A1-212ENST00000482478 SMAD3P84022 425 aaKnown RBP18.03■□□□□ 0.48
COL16A1-212ENST00000482478 PTPN11Q06124 597 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-212ENST00000482478 MFSD10Q14728 455 aa18.03■□□□□ 0.48
COL16A1-212ENST00000482478 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
COL16A1-212ENST00000482478 PPP1R18Q6NYC8 613 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms