RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 CDK5RAP3Q96JB5 506 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 MBOAT7Q96N66 472 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 ANO3Q9BYT9 981 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 WDR46O15213 610 aaKnown RBP17.68■□□□□ 0.42
RXRA-202ENST00000481739 BACE1P56817 501 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 COBLL1Q53SF7 1204 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 MOB2Q70IA6 237 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 SLFN12Q8IYM2 578 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 MMTAG2Q9BU76 263 aaKnown RBP17.68■□□□□ 0.42
RXRA-202ENST00000481739 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 TANGO6Q9C0B7 1094 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 SAMSN1Q9NSI8 373 aaKnown RBP17.68■□□□□ 0.42
RXRA-202ENST00000481739 EMILIN3Q9NT22 766 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 R3HCC1Q9Y3T6 440 aaKnown RBP17.68■□□□□ 0.42
RXRA-202ENST00000481739 STK24Q9Y6E0 443 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 SNCAIPQ9Y6H5 919 aa17.68■□□□□ 0.42
RXRA-202ENST00000481739 KDM3AQ9Y4C1 1321 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 PIK3CDO00329 1044 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 PSMA7O14818 248 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 TBX3O15119 743 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 CCP110O43303 1012 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 EDIL3O43854 480 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 ARMCX5Q6P1M9 558 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 CNNM4Q6P4Q7 775 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 ADSSL1Q8N142 457 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 GIMAP8Q8ND71 665 aaPredicted RBP17.67■□□□□ 0.42
RXRA-202ENST00000481739 ELP3Q9H9T3 547 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 CTNND2Q9UQB3 1225 aa17.67■□□□□ 0.42
RXRA-202ENST00000481739 OTOFQ9HC10 1997 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 TRAF5O00463 557 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 MEIS2O14770 477 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 KLRC4O43908 158 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 HMGCS2P54868 508 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 NR1I3Q14994 352 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 USH1GQ495M9 461 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 KMT5BQ4FZB7 885 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 SV2BQ7L1I2 683 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 ARMC9Q7Z3E5 817 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 ANKRD13AQ8IZ07 590 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 C17orf53Q8N3J3 647 aaPredicted RBP17.66■□□□□ 0.42
RXRA-202ENST00000481739 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
RXRA-202ENST00000481739 NELFBQ8WX92 580 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 DHTKD1Q96HY7 919 aaPredicted RBP17.66■□□□□ 0.42
RXRA-202ENST00000481739 NT5C3AQ9H0P0 336 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 PHIPQ8WWQ0 1821 aa17.66■□□□□ 0.42
RXRA-202ENST00000481739 PVALEFA0A1B0GWK0 134 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 LRRC10BA6NIK2 292 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 SPDYE3A6NKU9 549 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 C19orf81C9J6K1 198 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 KIF2AO00139 706 aaPredicted RBP17.65■□□□□ 0.42
RXRA-202ENST00000481739 MARCH6O60337 910 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 VCAM1P19320 739 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 HYIQ5T013 277 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 CCDC174Q6PII3 467 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 SMYD4Q8IYR2 804 aaPredicted RBP17.65■□□□□ 0.42
RXRA-202ENST00000481739 CRYGNQ8WXF5 182 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 RPAP3Q9H6T3 665 aaPredicted RBP17.65■□□□□ 0.42
RXRA-202ENST00000481739 NMRK2Q9NPI5 230 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 EXOC1Q9NV70 894 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 INTS13Q9NVM9 706 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 TMOD4Q9NZQ9 345 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 AFG3L2Q9Y4W6 797 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 BICDL2A1A5D9 508 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 TUBB4AP04350 444 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 SREBF1P36956 1147 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 TBX2Q13207 712 aaPredicted RBP17.65■□□□□ 0.42
RXRA-202ENST00000481739 GRB10Q13322 594 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 ARID5BQ14865 1188 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 TMEM119Q4V9L6 283 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 SNX29Q8TEQ0 813 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 LARP4BQ92615 738 aaKnown RBP17.65■□□□□ 0.42
RXRA-202ENST00000481739 CLMNQ96JQ2 1002 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 KCNMB3Q9NPA1 279 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 LIMA1Q9UHB6 759 aaKnown RBP17.65■□□□□ 0.42
RXRA-202ENST00000481739 PCDHA12Q9UN75 941 aa17.65■□□□□ 0.42
RXRA-202ENST00000481739 USP17L15C9J2P7 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L13C9JLJ4 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L11C9JVI0 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L18D6R9N7 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L22D6RA61 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L17D6RBQ6 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L19D6RCP7 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L20D6RJB6 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 FLOT1O75955 427 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 PRCPP42785 496 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 STX17P56962 302 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 ARHGAP4P98171 946 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L24Q0WX57 530 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 Q4G0T1 1027 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 HAS1Q92839 578 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 SLF1Q9BQI6 1058 aa17.64■□□□□ 0.41
RXRA-202ENST00000481739 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
RXRA-202ENST00000481739 ITIH6Q6UXX5 1313 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 CIITAP33076 1130 aa17.63■□□□□ 0.41
RXRA-202ENST00000481739 ASIC1P78348 528 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms