RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 EARS2Q5JPH6 523 aaKnown RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 MORN1Q5T089 497 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 OLFML2BQ68BL8 750 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 FCHSD1Q86WN1 690 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 GIMAP8Q8ND71 665 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 RASGRP4Q8TDF6 673 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 USP6NLQ92738 828 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 GPRASP2Q96D09 838 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 ERO1AQ96HE7 468 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 SPATA32Q96LK8 384 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 AK8Q96MA6 479 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 INPP4AQ96PE3 977 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-225ENST00000481502 TAAR1Q96RJ0 339 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 USP28Q96RU2 1077 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 SENP7Q9BQF6 1050 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 MXRA8Q9BRK3 442 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 EFCC1Q9HA90 598 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 TBC1D22BQ9NU19 505 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 TMEM260Q9NX78 707 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 UBIAD1Q9Y5Z9 338 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 ZNF236Q9UL36 1845 aa9.37□□□□□ -0.91
SYNE1-225ENST00000481502 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 SMCHD1A6NHR9 2005 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 A0A1W2PQ27 194 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 A0A1W2PQ64 194 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 A0A1W2PQD8 194 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 GPR25O00155 361 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 TNPO2O14787 897 aaKnown RBP9.36□□□□□ -0.91
SYNE1-225ENST00000481502 SPTLC2O15270 562 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 NEMFO60524 1076 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 CCNT1O60563 726 aaKnown RBP9.36□□□□□ -0.91
SYNE1-225ENST00000481502 DTNBO60941 627 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 TRPA1O75762 1119 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 ADORA2AP29274 412 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 ZNF76P36508 570 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 FOSBP53539 338 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 STK38Q15208 465 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 ADALQ6DHV7 355 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 SLC30A10Q6XR72 485 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 DPP9Q86TI2 863 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 DNAJC5GQ8N7S2 189 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 C4orf32Q8N8J7 132 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 MTMR9Q96QG7 549 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 RIT2Q99578 217 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
SYNE1-225ENST00000481502 KCNMB3Q9NPA1 279 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 JADE2Q9NQC1 790 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 WBP1LQ9NX94 342 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 COL20A1Q9P218 1284 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 DDX25Q9UHL0 483 aaKnown RBP9.36□□□□□ -0.91
SYNE1-225ENST00000481502 GJD2Q9UKL4 321 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 PCDHB6Q9Y5E3 794 aa9.36□□□□□ -0.91
SYNE1-225ENST00000481502 SRPRBQ9Y5M8 271 aaKnown RBP9.36□□□□□ -0.91
SYNE1-225ENST00000481502 RBBP6Q7Z6E9 1792 aaKnown RBP9.35□□□□□ -0.91
SYNE1-225ENST00000481502 IGLV3-22A0A075B6J6 115 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 SOWAHBA6NEL2 793 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 FIBPO43427 364 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 EDIL3O43854 480 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 FKTNO75072 461 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 IGHA2P01877 340 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
SYNE1-225ENST00000481502 MUTP22033 750 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 LONP1P36776 959 aaKnown RBP9.35□□□□□ -0.91
SYNE1-225ENST00000481502 FXR2P51116 673 aaKnown RBP eCLIP9.35□□□□□ -0.91
SYNE1-225ENST00000481502 PDE4DQ08499 809 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 PTGDRQ13258 359 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 TMEM266Q2M3C6 531 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 WDR78Q5VTH9 848 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 KRI1Q8N9T8 703 aaKnown RBP9.35□□□□□ -0.91
SYNE1-225ENST00000481502 LEO1Q8WVC0 666 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-225ENST00000481502 APBA2Q99767 749 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 ABHD16BQ9H3Z7 469 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 VTA1Q9NP79 307 aa9.35□□□□□ -0.91
SYNE1-225ENST00000481502 NFASCO94856 1347 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 FAM237AA0A1B0GTK4 181 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 RBM47A0AV96 593 aaKnown RBP9.34□□□□□ -0.91
SYNE1-225ENST00000481502 GOLGA6L4A6NEF3 574 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 SPATA31C2B4DYI2 1134 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 FAM86B1E9PN63 330 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 NKRFO15226 690 aaKnown RBP eCLIP9.34□□□□□ -0.91
SYNE1-225ENST00000481502 CUTAO60888 179 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 TBC1D8O95759 1140 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 FAM86B2P0C5J1 330 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 OR52Z1P0C646 297 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 EIF2AK2P19525 551 aaKnown RBP9.34□□□□□ -0.91
SYNE1-225ENST00000481502 MCM4P33991 863 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 MCM7P33993 719 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 PSMC4P43686 418 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 UBE2HP62256 183 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 MRPS9P82933 396 aaKnown RBP9.34□□□□□ -0.91
SYNE1-225ENST00000481502 ZNF174Q15697 407 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 CALCRLQ16602 461 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 SKOR2Q2VWA4 1001 aaPredicted RBP9.34□□□□□ -0.91
SYNE1-225ENST00000481502 FAM173BQ6P4H8 233 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 PLA2G4DQ86XP0 818 aa9.34□□□□□ -0.91
SYNE1-225ENST00000481502 IGSF22Q8N9C0 903 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms