RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 TDHQ8IZJ6 230 aa14.86□□□□□ -0.03
ABCF3-215ENST00000481116 SAMD3Q8N6K7 520 aa14.86□□□□□ -0.03
ABCF3-215ENST00000481116 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
ABCF3-215ENST00000481116 LRCH3Q96II8 777 aa14.86□□□□□ -0.03
ABCF3-215ENST00000481116 TOX2Q96NM4 488 aa14.86□□□□□ -0.03
ABCF3-215ENST00000481116 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
ABCF3-215ENST00000481116 FAM217BQ9NTX9 383 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-215ENST00000481116 CNTNAP5Q8WYK1 1306 aa14.86□□□□□ -0.03
ABCF3-215ENST00000481116 TRIP12Q14669 1992 aaPredicted RBP14.85□□□□□ -0.03
ABCF3-215ENST00000481116 A0A1W2PPC1 479 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 MEIS2O14770 477 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 KIAA0355O15063 1070 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 CABYRO75952 493 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 RAG1P15918 1043 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 CASTP20810 708 aaKnown RBP14.85□□□□□ -0.03
ABCF3-215ENST00000481116 RPS6KB1P23443 525 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 CPT1AP50416 773 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 PURAQ00577 322 aaKnown RBP14.85□□□□□ -0.03
ABCF3-215ENST00000481116 ARHGAP1Q07960 439 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 VSIG10LQ86VR7 867 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 FAM126BQ8IXS8 530 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 SLC43A3Q8NBI5 491 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 SMARCC2Q8TAQ2 1214 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 AFG1LQ8WV93 481 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 BRF1Q92994 677 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 DDX41Q9UJV9 622 aaKnown RBP14.85□□□□□ -0.03
ABCF3-215ENST00000481116 MROH7Q68CQ1 1323 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 SCN5AQ14524 2016 aa14.85□□□□□ -0.03
ABCF3-215ENST00000481116 SZT2Q5T011 3432 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 A6NJR5 290 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 GH1P01241 217 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 CD4P01730 458 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 CCND2P30279 289 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 ADD1P35611 737 aaKnown RBP14.84□□□□□ -0.03
ABCF3-215ENST00000481116 FUT2Q10981 343 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 UBE2SQ16763 222 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 C9orf50Q5SZB4 431 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 HEATR3Q7Z4Q2 680 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 PPP1R12CQ9BZL4 782 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 TRPV6Q9H1D0 765 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 POLR3EQ9NVU0 708 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 RBM28Q9NW13 759 aaKnown RBP14.84□□□□□ -0.03
ABCF3-215ENST00000481116 RTEL1Q9NZ71 1219 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 TBX21Q9UL17 535 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 MRVI1Q9Y6F6 885 aa14.84□□□□□ -0.03
ABCF3-215ENST00000481116 TLR3O15455 904 aaKnown RBP14.83□□□□□ -0.04
ABCF3-215ENST00000481116 B4GALT4O60513 344 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 MMP3P08254 477 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 EPHB4P54760 987 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 CHMP4BP1P59074 171 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 MRPS9P82933 396 aaKnown RBP14.83□□□□□ -0.04
ABCF3-215ENST00000481116 SP2Q02086 613 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 SHHQ15465 462 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 WWC2Q6AWC2 1192 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 TYW1BQ6NUM6 668 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 CUL5Q93034 780 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 MTG1Q9BT17 334 aaPredicted RBP14.83□□□□□ -0.04
ABCF3-215ENST00000481116 BCAS3Q9H6U6 928 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 PSTPIP2Q9H939 334 aa14.83□□□□□ -0.04
ABCF3-215ENST00000481116 V9GY48 417 aaPredicted RBP14.83□□□□□ -0.04
ABCF3-215ENST00000481116 PPFIA3O75145 1194 aa14.82□□□□□ -0.04
ABCF3-215ENST00000481116 TIMP1P01033 207 aa14.82□□□□□ -0.04
ABCF3-215ENST00000481116 PSMA5P28066 241 aa14.82□□□□□ -0.04
ABCF3-215ENST00000481116 METAP2P50579 478 aaKnown RBP eCLIP14.82□□□□□ -0.04
ABCF3-215ENST00000481116 NBPF20Q3BBV1 942 aa14.82□□□□□ -0.04
ABCF3-215ENST00000481116 BRDTQ58F21 947 aaPredicted RBP14.82□□□□□ -0.04
ABCF3-215ENST00000481116 DHX37Q8IY37 1157 aaKnown RBP14.82□□□□□ -0.04
ABCF3-215ENST00000481116 LARP6Q9BRS8 491 aaKnown RBP14.82□□□□□ -0.04
ABCF3-215ENST00000481116 FRMPD4Q14CM0 1322 aa14.82□□□□□ -0.04
ABCF3-215ENST00000481116 UMODL1Q5DID0 1318 aa14.82□□□□□ -0.04
ABCF3-215ENST00000481116 PIK3CDO00329 1044 aa14.81□□□□□ -0.04
ABCF3-215ENST00000481116 CYP2C18P33260 490 aa14.81□□□□□ -0.04
ABCF3-215ENST00000481116 FAM47CQ5HY64 1035 aa14.81□□□□□ -0.04
ABCF3-215ENST00000481116 RUFY3Q7L099 469 aa14.81□□□□□ -0.04
ABCF3-215ENST00000481116 AGXT2Q9BYV1 514 aa14.81□□□□□ -0.04
ABCF3-215ENST00000481116 ALDH8A1Q9H2A2 487 aaPredicted RBP14.81□□□□□ -0.04
ABCF3-215ENST00000481116 ZSWIM6Q9HCJ5 1215 aa14.81□□□□□ -0.04
ABCF3-215ENST00000481116 TRMT13Q9NUP7 481 aaKnown RBP14.81□□□□□ -0.04
ABCF3-215ENST00000481116 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
ABCF3-215ENST00000481116 STXBP3O00186 592 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 EPB41L2O43491 1005 aaKnown RBP14.8□□□□□ -0.04
ABCF3-215ENST00000481116 GGPS1O95749 300 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 CYP2C9P11712 490 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 UBA1P22314 1058 aaKnown RBP14.8□□□□□ -0.04
ABCF3-215ENST00000481116 NAPAP54920 295 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 CCT2P78371 535 aaKnown RBP14.8□□□□□ -0.04
ABCF3-215ENST00000481116 FPGSQ05932 587 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 SEMA3FQ13275 785 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 TOB2Q14106 344 aaPredicted RBP14.8□□□□□ -0.04
ABCF3-215ENST00000481116 LRIT3Q3SXY7 679 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 CELF3Q5SZQ8 465 aaKnown RBP14.8□□□□□ -0.04
ABCF3-215ENST00000481116 MYSM1Q5VVJ2 828 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 KAT2BQ92831 832 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 PGBD1Q96JS3 809 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
ABCF3-215ENST00000481116 NCOA5Q9HCD5 579 aaKnown RBP14.8□□□□□ -0.04
ABCF3-215ENST00000481116 GBF1Q92538 1859 aa14.8□□□□□ -0.04
ABCF3-215ENST00000481116 KPNA6O60684 536 aa14.79□□□□□ -0.04
ABCF3-215ENST00000481116 ZNF286BP0CG31 522 aa14.79□□□□□ -0.04
ABCF3-215ENST00000481116 CSF2RAP15509 400 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms