RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CLRN2A0PK11 232 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 FRAT2O75474 233 aaPredicted RBP8.06□□□□□ -1.12
LRCH3-216ENST00000481048 TIAF1O95411 115 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 DRD2P14416 443 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 CRKP46108 304 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 GYG1P46976 350 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 USP11P51784 963 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 ARHGEF6Q15052 776 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 ALDH1L2Q3SY69 923 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 FKBP1CQ5VVH2 108 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 VGLL2Q8N8G2 317 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 ERO1AQ96HE7 468 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 PUS3Q9BZE2 481 aaKnown RBP8.06□□□□□ -1.12
LRCH3-216ENST00000481048 BICC1Q9H694 974 aaKnown RBP8.06□□□□□ -1.12
LRCH3-216ENST00000481048 TDRD3Q9H7E2 651 aaKnown RBP8.06□□□□□ -1.12
LRCH3-216ENST00000481048 PCDHAC2Q9Y5I4 1007 aa8.06□□□□□ -1.12
LRCH3-216ENST00000481048 OTOFQ9HC10 1997 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 IGF2BP3O00425 579 aaKnown RBP eCLIP8.05□□□□□ -1.12
LRCH3-216ENST00000481048 IFIT1P09914 478 aaKnown RBP8.05□□□□□ -1.12
LRCH3-216ENST00000481048 CT47B1P0C2W7 299 aaPredicted RBP8.05□□□□□ -1.12
LRCH3-216ENST00000481048 ESRRAP11474 423 aaPredicted RBP8.05□□□□□ -1.12
LRCH3-216ENST00000481048 FOSL1P15407 271 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 SOX10P56693 466 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 METTL24Q5JXM2 366 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 EXOSC6Q5RKV6 272 aaKnown RBP8.05□□□□□ -1.12
LRCH3-216ENST00000481048 PAOXQ6QHF9 649 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 HHIPL2Q6UWX4 724 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 FAM83AQ86UY5 434 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 ABI1Q8IZP0 508 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 FBLIM1Q8WUP2 373 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 TEKT1Q969V4 418 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 CLMNQ96JQ2 1002 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 ZDHHC15Q96MV8 337 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 TEPSINQ96N21 525 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 USP44Q9H0E7 712 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 R3HDMLQ9H3Y0 253 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 SOX17Q9H6I2 414 aaPredicted RBP8.05□□□□□ -1.12
LRCH3-216ENST00000481048 TMOD2Q9NZR1 351 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 FOXD3Q9UJU5 478 aaPredicted RBP8.05□□□□□ -1.12
LRCH3-216ENST00000481048 SSC5DA1L4H1 1573 aa8.05□□□□□ -1.12
LRCH3-216ENST00000481048 MYH2Q9UKX2 1941 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 WDHD1O75717 1129 aaPredicted RBP8.04□□□□□ -1.12
LRCH3-216ENST00000481048 FGFR2P21802 821 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 GTF2A2P52657 109 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 GSTM4Q03013 218 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 SLFN5Q08AF3 891 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 PUM3Q15397 648 aaKnown RBP8.04□□□□□ -1.12
LRCH3-216ENST00000481048 LRRC24Q50LG9 513 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 CDPF1Q6NVV7 123 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 OTOP1Q7RTM1 612 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 SHISA5Q8N114 240 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 ANKRD44Q8N8A2 993 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.04□□□□□ -1.12
LRCH3-216ENST00000481048 WDR66Q8TBY9 1149 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 LPIN2Q92539 896 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 OPTNQ96CV9 577 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 BHLHE41Q9C0J9 482 aaPredicted RBP8.04□□□□□ -1.12
LRCH3-216ENST00000481048 ZCCHC17Q9NP64 241 aaKnown RBP8.04□□□□□ -1.12
LRCH3-216ENST00000481048 LATS2Q9NRM7 1088 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 FZD1Q9UP38 647 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 JAG2Q9Y219 1238 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 TRIM17Q9Y577 477 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 CSADQ9Y600 493 aa8.04□□□□□ -1.12
LRCH3-216ENST00000481048 RBBP6Q7Z6E9 1792 aaKnown RBP8.04□□□□□ -1.12
LRCH3-216ENST00000481048 CEP290O15078 2479 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 TCP10L2B9ZVM9 353 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 EYA2O00167 538 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 SLC5A1P13866 664 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 SP3Q02447 781 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 EHHADHQ08426 723 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 CRHR2Q13324 411 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 DCAF15Q66K64 600 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 ERO1BQ86YB8 467 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 SSH1Q8WYL5 1049 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 PTPN18Q99952 460 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 ZFYVE28Q9HCC9 887 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 CCDC39Q9UFE4 941 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 AOX1Q06278 1338 aa8.03□□□□□ -1.12
LRCH3-216ENST00000481048 TNRC18O15417 2968 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 DOCK3Q8IZD9 2030 aa8.02□□□□□ -1.13
LRCH3-216ENST00000481048 RPAP1Q9BWH6 1393 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 KRTAP4-8A0A0G2JLE6 195 aa8.02□□□□□ -1.13
LRCH3-216ENST00000481048 CIAO1O76071 339 aa8.02□□□□□ -1.13
LRCH3-216ENST00000481048 USP5P45974 858 aa8.02□□□□□ -1.13
LRCH3-216ENST00000481048 RFX5P48382 616 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 CHAF1AQ13111 956 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 VGLL4Q14135 290 aa8.02□□□□□ -1.13
LRCH3-216ENST00000481048 CPSF6Q16630 551 aaKnown RBP eCLIP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 APOBEC3HQ6NTF7 200 aaKnown RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 TRMT2AQ8IZ69 625 aaKnown RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 C2CD4AQ8NCU7 369 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
LRCH3-216ENST00000481048 PTPN22Q9Y2R2 807 aa8.02□□□□□ -1.13
LRCH3-216ENST00000481048 CCL15-CCL14A0A0B4J2E2 113 aa8.01□□□□□ -1.13
LRCH3-216ENST00000481048 METTL12A8MUP2 240 aa8.01□□□□□ -1.13
LRCH3-216ENST00000481048 UBTFL1P0CB47 393 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms