RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 GPKOWQ92917 476 aaPredicted RBP eCLIP23.21■■□□□ 1.31
VPS36-204ENST00000480923 TRIM43Q96BQ3 446 aaPredicted RBP23.21■■□□□ 1.31
VPS36-204ENST00000480923 PSTPIP2Q9H939 334 aa23.21■■□□□ 1.31
VPS36-204ENST00000480923 TMEM39AQ9NV64 488 aa23.21■■□□□ 1.31
VPS36-204ENST00000480923 GH1P01241 217 aa23.2■■□□□ 1.3
VPS36-204ENST00000480923 CDK7P50613 346 aa23.2■■□□□ 1.3
VPS36-204ENST00000480923 ITGA7Q13683 1181 aa23.2■■□□□ 1.3
VPS36-204ENST00000480923 RUFY3Q7L099 469 aa23.2■■□□□ 1.3
VPS36-204ENST00000480923 ZFP91Q96JP5 570 aaPredicted RBP23.2■■□□□ 1.3
VPS36-204ENST00000480923 ZSWIM6Q9HCJ5 1215 aa23.2■■□□□ 1.3
VPS36-204ENST00000480923 FAM217BQ9NTX9 383 aaPredicted RBP23.2■■□□□ 1.3
VPS36-204ENST00000480923 CYP46A1Q9Y6A2 500 aa23.2■■□□□ 1.3
VPS36-204ENST00000480923 V9GY48 417 aaPredicted RBP23.2■■□□□ 1.3
VPS36-204ENST00000480923 DNAH12Q6ZR08 3092 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 CCDC196A0A1B0GTZ2 297 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 A0A1W2PPC1 479 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 PIK3CDO00329 1044 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 MEIS2O14770 477 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 PSMC6P62333 389 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 FAAP100Q0VG06 881 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 FUT2Q10981 343 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 FBXL16Q8N461 479 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 AGXT2Q9BYV1 514 aa23.19■■□□□ 1.3
VPS36-204ENST00000480923 DDX41Q9UJV9 622 aaKnown RBP23.19■■□□□ 1.3
VPS36-204ENST00000480923 TLR3O15455 904 aaKnown RBP23.18■■□□□ 1.3
VPS36-204ENST00000480923 ADD1P35611 737 aaKnown RBP23.18■■□□□ 1.3
VPS36-204ENST00000480923 PURAQ00577 322 aaKnown RBP23.18■■□□□ 1.3
VPS36-204ENST00000480923 WWC2Q6AWC2 1192 aa23.18■■□□□ 1.3
VPS36-204ENST00000480923 AFG1LQ8WV93 481 aa23.18■■□□□ 1.3
VPS36-204ENST00000480923 BADQ92934 168 aa23.18■■□□□ 1.3
VPS36-204ENST00000480923 FRMPD4Q14CM0 1322 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 A6NJR5 290 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 RGS20O76081 388 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 RAG1P15918 1043 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 NAPAP54920 295 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 UBE2SQ16763 222 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 KCNV1Q6PIU1 500 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 MTG1Q9BT17 334 aaPredicted RBP23.17■■□□□ 1.3
VPS36-204ENST00000480923 UPF3BQ9BZI7 483 aaKnown RBP23.17■■□□□ 1.3
VPS36-204ENST00000480923 TM6SF1Q9BZW5 370 aa23.17■■□□□ 1.3
VPS36-204ENST00000480923 GRIN2DO15399 1336 aa23.16■■□□□ 1.3
VPS36-204ENST00000480923 KIAA0355O15063 1070 aa23.16■■□□□ 1.3
VPS36-204ENST00000480923 KPNA6O60684 536 aa23.16■■□□□ 1.3
VPS36-204ENST00000480923 FXR1P51114 621 aaKnown RBP eCLIP23.16■■□□□ 1.3
VPS36-204ENST00000480923 ARHGAP1Q07960 439 aa23.16■■□□□ 1.3
VPS36-204ENST00000480923 FAM126BQ8IXS8 530 aa23.16■■□□□ 1.3
VPS36-204ENST00000480923 DHX37Q8IY37 1157 aaKnown RBP23.16■■□□□ 1.3
VPS36-204ENST00000480923 SLC43A3Q8NBI5 491 aa23.16■■□□□ 1.3
VPS36-204ENST00000480923 SEZ6LQ9BYH1 1024 aa23.16■■□□□ 1.3
VPS36-204ENST00000480923 LAMC2Q13753 1193 aa23.15■■□□□ 1.3
VPS36-204ENST00000480923 GNPTABQ3T906 1256 aa23.15■■□□□ 1.3
VPS36-204ENST00000480923 TDHQ8IZJ6 230 aa23.15■■□□□ 1.3
VPS36-204ENST00000480923 RTEL1Q9NZ71 1219 aa23.15■■□□□ 1.3
VPS36-204ENST00000480923 NID2Q14112 1375 aa23.14■■□□□ 1.3
VPS36-204ENST00000480923 SPDYE3A6NKU9 549 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 hCG_1984214I3L0E3 225 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 SORBS3O60504 671 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 STAM2O75886 525 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 MMP3P08254 477 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 ITGB8P26012 769 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 MRPS9P82933 396 aaKnown RBP23.14■■□□□ 1.29
VPS36-204ENST00000480923 TOB2Q14106 344 aaPredicted RBP23.14■■□□□ 1.29
VPS36-204ENST00000480923 PPP1R18Q6NYC8 613 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 ZNF713Q8N859 430 aaPredicted RBP23.14■■□□□ 1.29
VPS36-204ENST00000480923 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 TBX21Q9UL17 535 aa23.14■■□□□ 1.29
VPS36-204ENST00000480923 STXBP3O00186 592 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 EIF5BO60841 1220 aaKnown RBP23.13■■□□□ 1.29
VPS36-204ENST00000480923 GGPS1O95749 300 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 TGFB3P10600 412 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 PDIA3P30101 505 aaKnown RBP23.13■■□□□ 1.29
VPS36-204ENST00000480923 CHMP4BP1P59074 171 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 CCT2P78371 535 aaKnown RBP23.13■■□□□ 1.29
VPS36-204ENST00000480923 PCNX4Q63HM2 1172 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 TYW1BQ6NUM6 668 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 XRRA1Q6P2D8 792 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 EMID1Q96A84 441 aaPredicted RBP23.13■■□□□ 1.29
VPS36-204ENST00000480923 BARHL2Q9NY43 387 aa23.13■■□□□ 1.29
VPS36-204ENST00000480923 CD4P01730 458 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 UBA1P22314 1058 aaKnown RBP23.12■■□□□ 1.29
VPS36-204ENST00000480923 ADCY7P51828 1080 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 EVCP57679 992 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 AKAP17AQ02040 695 aaKnown RBP23.12■■□□□ 1.29
VPS36-204ENST00000480923 DGKDQ16760 1214 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 PFKFB3Q16875 520 aaPredicted RBP23.12■■□□□ 1.29
VPS36-204ENST00000480923 NBPF20Q3BBV1 942 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 FAM47CQ5HY64 1035 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 CELF3Q5SZQ8 465 aaKnown RBP23.12■■□□□ 1.29
VPS36-204ENST00000480923 INPP4AQ96PE3 977 aaPredicted RBP23.12■■□□□ 1.29
VPS36-204ENST00000480923 TRPV6Q9H1D0 765 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 EHMT1Q9H9B1 1298 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 NCOA5Q9HCD5 579 aaKnown RBP23.12■■□□□ 1.29
VPS36-204ENST00000480923 RIC8AQ9NPQ8 531 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 PCDHA6Q9UN73 950 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 PCDHA8Q9Y5H6 950 aa23.12■■□□□ 1.29
VPS36-204ENST00000480923 SMCO2A6NFE2 343 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 TIMP1P01033 207 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 SCG2P13521 617 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 SP2Q02086 613 aa23.11■■□□□ 1.29
VPS36-204ENST00000480923 PPTC7Q8NI37 304 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms