RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 A6NHS1 94 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 CCND1P24385 295 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 LTKP29376 864 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 ZNF174Q15697 407 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 PKN1Q16512 942 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 ASTE1Q2TB18 679 aaPredicted RBP11.73□□□□□ -0.53
SIK3-210ENST00000480468 ODF2Q5BJF6 829 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 SPDYCQ5MJ68 293 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 APLFQ8IW19 511 aaPredicted RBP11.73□□□□□ -0.53
SIK3-210ENST00000480468 ZNF654Q8IZM8 581 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 CNOT6LQ96LI5 555 aaKnown RBP11.73□□□□□ -0.53
SIK3-210ENST00000480468 PCMTD1Q96MG8 357 aaPredicted RBP11.73□□□□□ -0.53
SIK3-210ENST00000480468 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
SIK3-210ENST00000480468 EDEM3Q9BZQ6 932 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 TBX22Q9Y458 520 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 FER1L4A9Z1Z3 1794 aa11.73□□□□□ -0.53
SIK3-210ENST00000480468 WNT7AO00755 349 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 PRPF3O43395 683 aaKnown RBP11.72□□□□□ -0.53
SIK3-210ENST00000480468 RAD51CO43502 376 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 KLRC4O43908 158 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 CCNE1P24864 410 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 PDCD2Q16342 344 aaPredicted RBP11.72□□□□□ -0.53
SIK3-210ENST00000480468 KIAA0753Q2KHM9 967 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 MFSD6Q6ZSS7 791 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 PIGWQ7Z7B1 504 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 LPIN2Q92539 896 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 TLCD1Q96CP7 247 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 ZNF317Q96PQ6 595 aaPredicted RBP11.72□□□□□ -0.53
SIK3-210ENST00000480468 NOC4LQ9BVI4 516 aaKnown RBP11.72□□□□□ -0.53
SIK3-210ENST00000480468 RTL9Q8NET4 1388 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 NUP188Q5SRE5 1749 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 ATP2C2O75185 946 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 STAT6P42226 847 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 MCAMP43121 646 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 MTIF2P46199 727 aaKnown RBP11.72□□□□□ -0.53
SIK3-210ENST00000480468 ERVK-9P63128 1117 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 SEPT2Q15019 361 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 IFI16Q16666 785 aaKnown RBP11.72□□□□□ -0.53
SIK3-210ENST00000480468 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
SIK3-210ENST00000480468 PARD3BQ8TEW8 1205 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 AGAP11Q8TF27 550 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 P2RX5Q93086 422 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 ABCB11O95342 1321 aa11.72□□□□□ -0.53
SIK3-210ENST00000480468 GOLGA6L10A0A0M3HER8 536 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 TCRBV5S4A2TA0A5A2 114 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 PDE6AP16499 860 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 RPS6KA3P51812 740 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 SLC5A9Q2M3M2 681 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 MEI1Q5TIA1 1274 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 PI16Q6UXB8 463 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.53
SIK3-210ENST00000480468 IFNL3Q8IZI9 196 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
SIK3-210ENST00000480468 PSMD1Q99460 953 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 NAPBQ9H115 298 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 LUC7LQ9NQ29 371 aaKnown RBP11.71□□□□□ -0.53
SIK3-210ENST00000480468 DISC1Q9NRI5 854 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 NOVA2Q9UNW9 492 aaKnown RBP11.71□□□□□ -0.53
SIK3-210ENST00000480468 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 AFF2P51816 1311 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.53
SIK3-210ENST00000480468 ABLIM1O14639 778 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 CLTAP09496 248 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 PEX19P40855 299 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 RAB27AP51159 221 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 EIF3BP55884 814 aaKnown RBP11.71□□□□□ -0.54
SIK3-210ENST00000480468 MAGOHP61326 146 aaKnown RBP11.71□□□□□ -0.54
SIK3-210ENST00000480468 LMNB2Q03252 620 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 FUT2Q10981 343 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 HLTFQ14527 1009 aaKnown RBP eCLIP11.71□□□□□ -0.54
SIK3-210ENST00000480468 NPY5RQ15761 445 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 IL17AQ16552 155 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.54
SIK3-210ENST00000480468 MFN1Q8IWA4 741 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 CCDC82Q8N4S0 544 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 TEX9Q8N6V9 391 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 MAGOHBQ96A72 148 aaKnown RBP11.71□□□□□ -0.54
SIK3-210ENST00000480468 EPB41L4AQ9HCS5 686 aaPredicted RBP11.71□□□□□ -0.54
SIK3-210ENST00000480468 TACC3Q9Y6A5 838 aa11.71□□□□□ -0.54
SIK3-210ENST00000480468 NQO1P15559 274 aaKnown RBP11.7□□□□□ -0.54
SIK3-210ENST00000480468 FERP16591 822 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 TRADDQ15628 312 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 NAB2Q15742 525 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 CCDC38Q502W7 563 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 ZBTB10Q96DT7 871 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 CCDC134Q9H6E4 229 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 INCENPQ9NQS7 918 aa11.7□□□□□ -0.54
SIK3-210ENST00000480468 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms