RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.49
CDK11A-216ENST00000479362 CTDP1Q9Y5B0 961 aaPredicted RBP11.96□□□□□ -0.49
CDK11A-216ENST00000479362 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 PNMA6FA0A0J9YX94 578 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
CDK11A-216ENST00000479362 GRXCR1A8MXD5 290 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 hCG_1984214I3L0E3 225 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 FDX1P10109 184 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 PDCP20941 246 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 FOSBP53539 338 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 SNAP25P60880 206 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 NHLH1Q02575 133 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 TLE2Q04725 743 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 FPGSQ05932 587 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 PKN1Q16512 942 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 Q3C1V9 767 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 HEATR3Q7Z4Q2 680 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 ZNF713Q8N859 430 aaPredicted RBP11.95□□□□□ -0.5
CDK11A-216ENST00000479362 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
CDK11A-216ENST00000479362 AIFM3Q96NN9 605 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 ALG1Q9BT22 464 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
CDK11A-216ENST00000479362 RBPJLQ9UBG7 517 aa11.95□□□□□ -0.5
CDK11A-216ENST00000479362 PRRC2BQ5JSZ5 2229 aaKnown RBP11.94□□□□□ -0.5
CDK11A-216ENST00000479362 KBTBD13C9JR72 458 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 VWA5AO00534 786 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 KIAA0355O15063 1070 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 ZBED4O75132 1171 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 IGHA2P01877 340 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 XBP1P17861 261 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 CNGA1P29973 690 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 HERVK_113P62684 666 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 ERVK-24P63145 666 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 MAP2K5Q13163 448 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 TRIM29Q14134 588 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 MFSD14CQ5VZR4 134 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 WWC2Q6AWC2 1192 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 CCDC174Q6PII3 467 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 PLEKHH3Q7Z736 793 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 C8orf76Q96K31 380 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 AMNQ9BXJ7 453 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 SLC38A10Q9HBR0 1119 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
CDK11A-216ENST00000479362 STXBP3O00186 592 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 PPP1R11O60927 126 aaPredicted RBP11.93□□□□□ -0.5
CDK11A-216ENST00000479362 ICAM1P05362 532 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 CLTBP09497 229 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 CYBAP13498 195 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 NAPAP54920 295 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 AAK1Q2M2I8 961 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 RASIP1Q5U651 963 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 LARP1BQ659C4 914 aaKnown RBP11.93□□□□□ -0.5
CDK11A-216ENST00000479362 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 LBX2Q6XYB7 198 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 FBXO11Q86XK2 927 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 MB21D1Q8N884 522 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 ARRDC4Q8NCT1 418 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 GTF3C2Q8WUA4 911 aaPredicted RBP11.93□□□□□ -0.5
CDK11A-216ENST00000479362 CCDC12Q8WUD4 166 aaPredicted RBP11.93□□□□□ -0.5
CDK11A-216ENST00000479362 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.58e-8■■■□□ 15.1
CDK11A-216ENST00000479362 BARHL2Q9NY43 387 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 VPS54Q9P1Q0 977 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 ZDBF2Q9HCK1 2354 aa11.93□□□□□ -0.5
CDK11A-216ENST00000479362 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
CDK11A-216ENST00000479362 PI4K2BG5E9Z4 385 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 H3BQV1 296 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 RAG1P15918 1043 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 SYT1P21579 422 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 CYP2C19P33261 490 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 ADCYAP1R1P41586 468 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 OAZ1P54368 228 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 TRAF1Q13077 416 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 USH1GQ495M9 461 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 KRT40Q6A162 431 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 CPXCR1Q8N123 301 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 FAM177A1Q8N128 213 aaPredicted RBP11.92□□□□□ -0.5
CDK11A-216ENST00000479362 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 FERMT2Q96AC1 680 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 PAGR1Q9BTK6 254 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 RAVER2Q9HCJ3 691 aaKnown RBP11.92□□□□□ -0.5
CDK11A-216ENST00000479362 SH3GLB2Q9NR46 395 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 PNMA2Q9UL42 364 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 CCPG1Q9ULG6 757 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 PCDHA1Q9Y5I3 950 aa11.92□□□□□ -0.5
CDK11A-216ENST00000479362 ZNF318Q5VUA4 2279 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 DCHS1Q96JQ0 3298 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 ZNF536O15090 1300 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 ABCB11O95342 1321 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 STX6O43752 255 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 TLL1O43897 1013 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 TAL1P17542 331 aaPredicted RBP11.91□□□□□ -0.5
CDK11A-216ENST00000479362 DDIT3P35638 169 aa11.91□□□□□ -0.5
CDK11A-216ENST00000479362 GUCY1B3Q02153 619 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms