RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 EMID1Q96A84 441 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-217ENST00000479161 AP5M1Q9H0R1 490 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 STK36Q9NRP7 1315 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 SMCO2A6NFE2 343 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 ZEB2O60315 1214 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 CABYRO75952 493 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 DEXIO95424 95 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 GNA11P29992 359 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 ICAM3P32942 547 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 CLK2P49760 499 aaKnown RBP17.76■□□□□ 0.43
C9orf3-217ENST00000479161 SSRP1Q08945 709 aaKnown RBP17.76■□□□□ 0.43
C9orf3-217ENST00000479161 FCHSD1Q86WN1 690 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 GPKOWQ92917 476 aaPredicted RBP eCLIP17.76■□□□□ 0.43
C9orf3-217ENST00000479161 INPP4AQ96PE3 977 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-217ENST00000479161 EHMT1Q9H9B1 1298 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 NCOA5Q9HCD5 579 aaKnown RBP17.76■□□□□ 0.43
C9orf3-217ENST00000479161 NR2E3Q9Y5X4 410 aa17.76■□□□□ 0.43
C9orf3-217ENST00000479161 MYH7BA7E2Y1 1941 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 A6NJR5 290 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 MAFGO15525 162 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 KPNA6O60684 536 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 RGS20O76081 388 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 C6orf222P0C671 652 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-217ENST00000479161 TXNP10599 105 aaKnown RBP17.75■□□□□ 0.43
C9orf3-217ENST00000479161 CPT1AP50416 773 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 ADCY7P51828 1080 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 ACLYP53396 1101 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 SCRN1Q12765 414 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 KCNA10Q16322 511 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 FSCN1Q16658 493 aaKnown RBP17.75■□□□□ 0.43
C9orf3-217ENST00000479161 GNPTABQ3T906 1256 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 GNASQ5JWF2 1037 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 GALNT17Q6IS24 598 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 CCDC148Q8NFR7 591 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 PHKBQ93100 1093 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 SENP6Q9GZR1 1112 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-217ENST00000479161 C6orf50Q9HD87 102 aa17.75■□□□□ 0.43
C9orf3-217ENST00000479161 DDX41Q9UJV9 622 aaKnown RBP17.75■□□□□ 0.43
C9orf3-217ENST00000479161 DDX49Q9Y6V7 483 aaKnown RBP17.75■□□□□ 0.43
C9orf3-217ENST00000479161 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-217ENST00000479161 MRPS9P82933 396 aaKnown RBP17.74■□□□□ 0.43
C9orf3-217ENST00000479161 RABEP1Q15276 862 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 BRDTQ58F21 947 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-217ENST00000479161 SLC39A5Q6ZMH5 540 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 NOL8Q76FK4 1167 aaKnown RBP17.74■□□□□ 0.43
C9orf3-217ENST00000479161 LENG1Q96BZ8 264 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-217ENST00000479161 CDHR1Q96JP9 859 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 SENP7Q9BQF6 1050 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 SLC26A6Q9BXS9 759 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
C9orf3-217ENST00000479161 A0A1W2PQ45 241 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-217ENST00000479161 A0A1W2PQY0 241 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 EVI5O60447 810 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 ASGR1P07306 291 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 ME3Q16798 604 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 PRPF38BQ5VTL8 546 aaKnown RBP17.73■□□□□ 0.43
C9orf3-217ENST00000479161 IL31RAQ8NI17 732 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 DPF3Q92784 378 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 GTF3C6Q969F1 213 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 ZSCAN31Q96LW9 406 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-217ENST00000479161 GLT1D1Q96MS3 346 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
C9orf3-217ENST00000479161 SCN10AQ9Y5Y9 1956 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 MYADML2A6NDP7 307 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 SPATA31C2B4DYI2 1134 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 FIBPO43427 364 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 ARIH2O95376 493 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 GH1P01241 217 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 MYCLP12524 364 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-217ENST00000479161 LAMC2Q13753 1193 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 SEPT14Q6ZU15 432 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 GPRASP2Q96D09 838 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 TBC1D32Q96NH3 1257 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 TOX2Q96NM4 488 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
C9orf3-217ENST00000479161 BACH2Q9BYV9 841 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 MRVI1Q9Y6F6 885 aa17.72■□□□□ 0.43
C9orf3-217ENST00000479161 HOXD8P13378 290 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-217ENST00000479161 SREBF1P36956 1147 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 ARHGAP1Q07960 439 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 STK3Q13188 491 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 LRRC26Q2I0M4 334 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 ANKRD33Q7Z3H0 272 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 NLRX1Q86UT6 975 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 SLC43A3Q8NBI5 491 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 DAGLBQ8NCG7 672 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 GIMAP8Q8ND71 665 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-217ENST00000479161 OR6J1Q8NGC5 347 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 WASF1Q92558 559 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 STARD7Q9NQZ5 370 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 SH2B1Q9NRF2 756 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-217ENST00000479161 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 UBIAD1Q9Y5Z9 338 aa17.71■□□□□ 0.43
C9orf3-217ENST00000479161 MROH7Q68CQ1 1323 aa17.71■□□□□ 0.42
C9orf3-217ENST00000479161 CTDNEP1O95476 244 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms