RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 CHAMP1Q96JM3 812 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 APBA2Q99767 749 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 MCMBPQ9BTE3 642 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 CAPN10Q9HC96 672 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 STRIP2Q9ULQ0 834 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 PLA2G2DQ9UNK4 145 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 COA3Q9Y2R0 106 aaPredicted RBP2.36□□□□□ -2.03
SRRM1-211ENST00000478890 C7orf72A4D263 438 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 C22orf46C9J442 243 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 ZBTB7AO95365 584 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 ERBB2P04626 1255 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 THBDP07204 575 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 SNRPB2P08579 225 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 PLS3P13797 630 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 IGFBP6P24592 240 aaPredicted RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 GIPRP48546 466 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 SARSP49591 514 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 CEBPAP49715 358 aaPredicted RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 RPL11P62913 178 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 HDLBPQ00341 1268 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 GNL2Q13823 731 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 PRAMEF18Q5VWM3 479 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 CD300LDQ6UXZ3 194 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 ETV3LQ6ZN32 361 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 B3GNT8Q7Z7M8 397 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 FERMT3Q86UX7 667 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 FAM124AQ86V42 546 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 VPS37DQ86XT2 251 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 TEX2Q8IWB9 1127 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 CARFQ8N187 725 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 TTC9BQ8N6N2 239 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 BVESQ8NE79 360 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 SH3RF3Q8TEJ3 882 aaPredicted RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 ZNF526Q8TF50 670 aaPredicted RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 KLHL6Q8WZ60 621 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 TSPAN17Q96FV3 270 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 RCC1LQ96I51 464 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 GPRC5CQ9NQ84 441 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 ACTR10Q9NZ32 417 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 APEX2Q9UBZ4 518 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 SIT1Q9Y3P8 196 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 R3HCC1Q9Y3T6 440 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 MRVI1Q9Y6F6 885 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 ZNF536O15090 1300 aa2.35□□□□□ -2.03
SRRM1-211ENST00000478890 WDR33Q9C0J8 1336 aaKnown RBP2.35□□□□□ -2.03
SRRM1-211ENST00000478890 AGRPO00253 132 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 MEFVO15553 781 aaPredicted RBP2.34□□□□□ -2.03
SRRM1-211ENST00000478890 DDAH1O94760 285 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 FBLN1P23142 703 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 VAMP1P23763 118 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 FPR2P25090 351 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 ECI1P42126 302 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 CACNB2Q08289 660 aaPredicted RBP2.34□□□□□ -2.03
SRRM1-211ENST00000478890 NCAPHQ15003 741 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 VWA3BQ502W6 1294 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 TNNI3KQ59H18 835 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 GTF2IRD2BQ6EKJ0 949 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 BORAQ6PGQ7 559 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 C6orf15Q6UXA7 325 aaPredicted RBP2.34□□□□□ -2.03
SRRM1-211ENST00000478890 MILR1Q7Z6M3 343 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 SAPCD2Q86UD0 394 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 GTF2IRD2Q86UP8 949 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 HOMEZQ8IX15 550 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 ARHGEF39Q8N4T4 335 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 TP53I13Q8NBR0 393 aaPredicted RBP2.34□□□□□ -2.03
SRRM1-211ENST00000478890 NLGN2Q8NFZ4 835 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 RASGRP4Q8TDF6 673 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 BTN2A2Q8WVV5 523 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 SEC14L1Q92503 715 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 TRMT2BQ96GJ1 504 aaKnown RBP2.34□□□□□ -2.03
SRRM1-211ENST00000478890 SHDQ96IW2 340 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 LOXL4Q96JB6 756 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 SEC16BQ96JE7 1060 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 LGR4Q9BXB1 951 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 TGIF2Q9GZN2 237 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 ACBD3Q9H3P7 528 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 FBLN5Q9UBX5 448 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 ING1Q9UK53 422 aaPredicted RBP2.34□□□□□ -2.03
SRRM1-211ENST00000478890 EMC9Q9Y3B6 208 aa2.34□□□□□ -2.03
SRRM1-211ENST00000478890 IRS2Q9Y4H2 1338 aa2.34□□□□□ -2.04
SRRM1-211ENST00000478890 SH3D21A4FU49 640 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 CYP1A1P04798 512 aaPredicted RBP2.33□□□□□ -2.04
SRRM1-211ENST00000478890 ERCC5P28715 1186 aaPredicted RBP2.33□□□□□ -2.04
SRRM1-211ENST00000478890 GJA8P48165 433 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 GTF2A2P52657 109 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF143P52747 638 aaPredicted RBP2.33□□□□□ -2.04
SRRM1-211ENST00000478890 HTRA3P83110 453 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 CAP1Q01518 475 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 KCNAB2Q13303 367 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 CHRNA2Q15822 529 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 RGL3Q3MIN7 710 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 IQCEQ6IPM2 695 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 CEP68Q76N32 757 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 STK32CQ86UX6 486 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 METTL16Q86W50 562 aaKnown RBP2.33□□□□□ -2.04
SRRM1-211ENST00000478890 TRIM59Q8IWR1 403 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 PPIL6Q8IXY8 311 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 FAM169BQ8N8A8 192 aa2.33□□□□□ -2.04
SRRM1-211ENST00000478890 CHST13Q8NET6 341 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms