RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 FCHSD1Q86WN1 690 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 VWCEQ96DN2 955 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 RRP36Q96EU6 259 aaKnown RBP21.7■■□□□ 1.06
SREBF1-212ENST00000478616 JAKMIP1Q96N16 626 aaKnown RBP21.7■■□□□ 1.06
SREBF1-212ENST00000478616 SCN5AQ14524 2016 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 RBAK-RBAKDNI3L0D1 243 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 GNAQP50148 359 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 TTLL4Q14679 1199 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 LRIT3Q3SXY7 679 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 FBXL16Q8N461 479 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 TMEM39AQ9NV64 488 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 UMODL1Q5DID0 1318 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 NID2Q14112 1375 aa21.69■■□□□ 1.06
SREBF1-212ENST00000478616 TRIP12Q14669 1992 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-212ENST00000478616 KLF18A0A0U1RQI7 1052 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 PIK3CDO00329 1044 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 CABYRO75952 493 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 MYCLP12524 364 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-212ENST00000478616 RPS6KB1P23443 525 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 APOBRQ0VD83 1088 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 SHHQ15465 462 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 Q6ZUG5 572 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 AFG1LQ8WV93 481 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 KAT2BQ92831 832 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 TRPV6Q9H1D0 765 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 TELO2Q9Y4R8 837 aa21.68■■□□□ 1.06
SREBF1-212ENST00000478616 DCDC2CA8MYV0 355 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 ADAMTS3O15072 1205 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 ZBTB43O43298 467 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 B4GALT4O60513 344 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 MMP3P08254 477 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 WWC2Q6AWC2 1192 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 C16orf59Q7L2K0 433 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 VTI1AQ96AJ9 217 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 CTAGE1Q96RT6 745 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 MPHOSPH6Q99547 160 aaKnown RBP21.67■■□□□ 1.06
SREBF1-212ENST00000478616 LBHD1Q9BQE6 289 aaPredicted RBP21.67■■□□□ 1.06
SREBF1-212ENST00000478616 PRKAG2Q9UGJ0 569 aa21.67■■□□□ 1.06
SREBF1-212ENST00000478616 B4DLN1 442 aa21.66■■□□□ 1.06
SREBF1-212ENST00000478616 REC8O95072 547 aa21.66■■□□□ 1.06
SREBF1-212ENST00000478616 TIMP1P01033 207 aa21.66■■□□□ 1.06
SREBF1-212ENST00000478616 MYL3P08590 195 aa21.66■■□□□ 1.06
SREBF1-212ENST00000478616 ADD1P35611 737 aaKnown RBP21.66■■□□□ 1.06
SREBF1-212ENST00000478616 CPT1AP50416 773 aa21.66■■□□□ 1.06
SREBF1-212ENST00000478616 MRPL12P52815 198 aaKnown RBP21.66■■□□□ 1.06
SREBF1-212ENST00000478616 RTN1Q16799 776 aa21.66■■□□□ 1.06
SREBF1-212ENST00000478616 EMID1Q96A84 441 aaPredicted RBP21.66■■□□□ 1.06
SREBF1-212ENST00000478616 TANC1Q9C0D5 1861 aa21.65■■□□□ 1.06
SREBF1-212ENST00000478616 MROH7Q68CQ1 1323 aa21.65■■□□□ 1.06
SREBF1-212ENST00000478616 EPB41L2O43491 1005 aaKnown RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 GH1P01241 217 aa21.65■■□□□ 1.06
SREBF1-212ENST00000478616 CENPBP07199 599 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 HMGB1P09429 215 aaKnown RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 HOXD8P13378 290 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 TRAF1Q13077 416 aa21.65■■□□□ 1.06
SREBF1-212ENST00000478616 TOB2Q14106 344 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 UBE2SQ16763 222 aa21.65■■□□□ 1.06
SREBF1-212ENST00000478616 BRF1Q92994 677 aa21.65■■□□□ 1.06
SREBF1-212ENST00000478616 INPP4AQ96PE3 977 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 MTG1Q9BT17 334 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 ALDH8A1Q9H2A2 487 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 TRMT13Q9NUP7 481 aaKnown RBP21.65■■□□□ 1.06
SREBF1-212ENST00000478616 POLR3EQ9NVU0 708 aa21.65■■□□□ 1.06
SREBF1-212ENST00000478616 TET1Q8NFU7 2136 aa21.64■■□□□ 1.06
SREBF1-212ENST00000478616 GOLGA8AA7E2F4 631 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 GOLGA8BA8MQT2 603 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 ZEB2O60315 1214 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 RAG1P15918 1043 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 UBA1P22314 1058 aaKnown RBP21.64■■□□□ 1.05
SREBF1-212ENST00000478616 RCAN1P53805 252 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 EVCP57679 992 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 NTRK3Q16288 839 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 NBPF20Q3BBV1 942 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 MYSM1Q5VVJ2 828 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 BLOC1S2Q6QNY1 142 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 NOC4LQ9BVI4 516 aaKnown RBP21.64■■□□□ 1.05
SREBF1-212ENST00000478616 ZSWIM6Q9HCJ5 1215 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 RBM28Q9NW13 759 aaKnown RBP21.64■■□□□ 1.05
SREBF1-212ENST00000478616 SEC63Q9UGP8 760 aaKnown RBP21.64■■□□□ 1.05
SREBF1-212ENST00000478616 MRVI1Q9Y6F6 885 aa21.64■■□□□ 1.05
SREBF1-212ENST00000478616 SORBS3O60504 671 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 CASTP20810 708 aaKnown RBP21.63■■□□□ 1.05
SREBF1-212ENST00000478616 CCND2P30279 289 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 ICAM3P32942 547 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 CYP2C18P33260 490 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 HSDL1Q3SXM5 330 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 MFSD5Q6N075 450 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 PPP1R12CQ9BZL4 782 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 WNT8AQ9H1J5 351 aa21.63■■□□□ 1.05
SREBF1-212ENST00000478616 V9GY48 417 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-212ENST00000478616 STXBP3O00186 592 aa21.62■■□□□ 1.05
SREBF1-212ENST00000478616 HIC1Q14526 733 aa21.62■■□□□ 1.05
SREBF1-212ENST00000478616 PKN1Q16512 942 aa21.62■■□□□ 1.05
SREBF1-212ENST00000478616 CELF3Q5SZQ8 465 aaKnown RBP21.62■■□□□ 1.05
SREBF1-212ENST00000478616 RTEL1Q9NZ71 1219 aa21.62■■□□□ 1.05
SREBF1-212ENST00000478616 GBF1Q92538 1859 aa21.62■■□□□ 1.05
SREBF1-212ENST00000478616 SPATA31C2B4DYI2 1134 aa21.61■■□□□ 1.05
SREBF1-212ENST00000478616 HAS3O00219 553 aa21.61■■□□□ 1.05
SREBF1-212ENST00000478616 CSF2RAP15509 400 aa21.61■■□□□ 1.05
SREBF1-212ENST00000478616 PCNX4Q63HM2 1172 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms