RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 TEX33O43247 280 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CCT6AP40227 531 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 JAG1P78504 1218 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 LRRC63Q05C16 580 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 SYCP1Q15431 976 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 USH1GQ495M9 461 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CSGALNACT2Q8N6G5 542 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 LRRC15Q8TF66 581 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 NUP88Q99567 741 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PNMA2Q9UL42 364 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MRPL11Q9Y3B7 192 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ABCB11O95342 1321 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ECE1P42892 770 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 DNM2P50570 870 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ZNF280AP59817 542 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MCM6Q14566 821 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 SRRTQ9BXP5 876 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MAPK8IP1Q9UQF2 711 aa13.93□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MFAP3LO75121 409 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ADKP55263 362 aaKnown RBP13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 STK4Q13043 487 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 LPAR1Q92633 364 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 NUP58Q9BVL2 599 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TMEM39BQ9GZU3 492 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PGAP2Q9UHJ9 254 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PITPNM2Q9BZ72 1349 aa13.92□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MYMKA6NI61 221 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 LGALS16A8MUM7 142 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 FECHP22830 423 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 UBXN1Q04323 297 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 RBL2Q08999 1139 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 FAM83BQ5T0W9 1011 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 SPICE1Q8N0Z3 855 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 RETREG2Q8NC44 543 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ETNPPLQ8TBG4 499 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 DDX12PQ92771 950 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 HOOK2Q96ED9 719 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 DEFB129Q9H1M3 183 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 VPS16Q9H269 839 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PHLPP2Q6ZVD8 1323 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TRIM49BA6NDI0 452 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 GCOM1H8Y6P7 765 aaPredicted RBP13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CCDC175P0C221 793 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 POLR2MP0CAP2 368 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ZNF76P36508 570 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ETF1P62495 437 aaKnown RBP13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 EHHADHQ08426 723 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 IRF2BP1Q8IU81 584 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TMTC1Q8IUR5 882 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CCDC65Q8IXS2 484 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ACER1Q8TDN7 264 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ZNF592Q92610 1267 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TSG101Q99816 390 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TAB2Q9NYJ8 693 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PPP2R2CQ9Y2T4 447 aa13.91□□□□□ -0.18
TRAF3IP3-213ENST00000478359 WDR46O15213 610 aaKnown RBP13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MUTP22033 750 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 RPA1P27694 616 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 CASP14P31944 242 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 NBPF9Q3BBW0 867 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 PRR16Q569H4 304 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MB21D1Q8N884 522 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 KIAA0895Q8NCT3 520 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 TUBGCP2Q9BSJ2 902 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ATAD5Q96QE3 1844 aa13.9□□□□□ -0.18
TRAF3IP3-213ENST00000478359 ZBTB7AO95365 584 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 GYPCP04921 128 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FCER1AP12319 257 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 IDEP14735 1019 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PMS1P54277 932 aaKnown RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 TSR1Q2NL82 804 aaKnown RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 DYMQ7RTS9 669 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CREBRFQ8IUR6 639 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 DUSP9Q99956 384 aaKnown RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SLC39A2Q9NP94 309 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 KIAA1024Q9UPX6 916 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 OPLAHO14841 1288 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CTNND1O60716 968 aaKnown RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PLA2G4BP0C869 781 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FDX1P10109 184 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SETQ01105 290 aaPredicted RBP13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 SPIRE1Q08AE8 756 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 RASA3Q14644 834 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 FKBP15Q5T1M5 1219 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 CYP26C1Q6V0L0 522 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 MIGA2Q7L4E1 593 aa13.89□□□□□ -0.19
TRAF3IP3-213ENST00000478359 REXO1L1PQ8IX06 675 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms