RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 AMNQ9BXJ7 453 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 WDR11Q9BZH6 1224 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 UPF3AQ9H1J1 476 aaKnown RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 MRPL11Q9Y3B7 192 aaKnown RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 PCDHA1Q9Y5I3 950 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 SZT2Q5T011 3432 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 ZBTB5O15062 677 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 CTAGE5O15320 804 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 PLEKHA8P1O95397 391 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 MYL3P08590 195 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 PSMC6P62333 389 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 TROAPQ12815 778 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 PPP2R5BQ15173 497 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 ARHGEF16Q5VV41 709 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 CCSAPQ6IQ19 270 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-205ENST00000477893 SEPT14Q6ZU15 432 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 MICU3Q86XE3 530 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 MCF2L2Q86YR7 1114 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 TDHQ8IZJ6 230 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 CTCFLQ8NI51 663 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-205ENST00000477893 IGDCC4Q8TDY8 1250 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 ZDHHC16Q969W1 377 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 TSEN34Q9BSV6 310 aaKnown RBP9.61□□□□□ -0.87
ERCC8-205ENST00000477893 TMEM39AQ9NV64 488 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 NAP1L2Q9ULW6 460 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-205ENST00000477893 GNEQ9Y223 722 aaKnown RBP9.61□□□□□ -0.87
ERCC8-205ENST00000477893 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
ERCC8-205ENST00000477893 A0A0U1RQG5 324 aaPredicted RBP9.6□□□□□ -0.87
ERCC8-205ENST00000477893 hCG_1642624A0A1W2PR95 340 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 DCDC2CA8MYV0 355 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 CYTH3O43739 400 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 GFRA3O60609 400 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 ARIH2O95376 493 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 TXNP10599 105 aaKnown RBP9.6□□□□□ -0.87
ERCC8-205ENST00000477893 MYCLP12524 364 aaPredicted RBP9.6□□□□□ -0.87
ERCC8-205ENST00000477893 CPA1P15085 419 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 RAG1P15918 1043 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 ITGB8P26012 769 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 CST5P28325 142 aaPredicted RBP9.6□□□□□ -0.87
ERCC8-205ENST00000477893 NECTIN1Q15223 517 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 RNF20Q5VTR2 975 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 IQSEC1Q6DN90 963 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 FCHSD1Q86WN1 690 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 MORC4Q8TE76 937 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 RMDN3Q96TC7 470 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 PPP1R12CQ9BZL4 782 aa9.6□□□□□ -0.87
ERCC8-205ENST00000477893 LTBP2Q14767 1821 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 B4DLN1 442 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 OPLAHO14841 1288 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 ZEB2O60315 1214 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 DDAH1O94760 285 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 EDNRBP24530 442 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 BMP8BP34820 402 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 MRPL12P52815 198 aaKnown RBP9.59□□□□□ -0.87
ERCC8-205ENST00000477893 FGD1P98174 961 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 KCNC4Q03721 635 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 FAAP100Q0VG06 881 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 LY6KQ17RY6 165 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 ADCK5Q3MIX3 580 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 DUSP28Q4G0W2 176 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 FAM47CQ5HY64 1035 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 DNERQ8NFT8 737 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 IL31RAQ8NI17 732 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 NSUN6Q8TEA1 469 aaKnown RBP9.59□□□□□ -0.87
ERCC8-205ENST00000477893 SCFD2Q8WU76 684 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 RRP36Q96EU6 259 aaKnown RBP9.59□□□□□ -0.87
ERCC8-205ENST00000477893 TMEM87BQ96K49 555 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 NEK1Q96PY6 1258 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 PXMP2Q9NR77 195 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 SEC63Q9UGP8 760 aaKnown RBP9.59□□□□□ -0.87
ERCC8-205ENST00000477893 SLC12A7Q9Y666 1083 aa9.59□□□□□ -0.87
ERCC8-205ENST00000477893 ELP1O95163 1332 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 MYH6P13533 1939 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 PNMA6FA0A0J9YX94 578 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 A0A1W2PPC1 479 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 GCOM1H8Y6P7 765 aaPredicted RBP9.58□□□□□ -0.88
ERCC8-205ENST00000477893 ARVCFO00192 962 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 POLR2MP0CAP2 368 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 KIF5BP33176 963 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 CPT1AP50416 773 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 HSD17B4P51659 736 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 ITGA7Q13683 1181 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 TTLL4Q14679 1199 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 STXBP2Q15833 593 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 PROX2Q3B8N5 592 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 C9orf50Q5SZB4 431 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 C1orf53Q5VUE5 145 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 SRBD1Q8N5C6 995 aaKnown RBP9.58□□□□□ -0.88
ERCC8-205ENST00000477893 RGS22Q8NE09 1264 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 MTMR8Q96EF0 704 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 TRPV6Q9H1D0 765 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 RIOX1Q9H6W3 641 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 MRVI1Q9Y6F6 885 aa9.58□□□□□ -0.88
ERCC8-205ENST00000477893 MROH7Q68CQ1 1323 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 LOC102724159A0A0B4J2E5 919 aa9.57□□□□□ -0.88
ERCC8-205ENST00000477893 RBM47A0AV96 593 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms