RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 PRRC2BQ5JSZ5 2229 aaKnown RBP7.61□□□□□ -1.19
LINC00173-202ENST00000477702 WDFY4Q6ZS81 3184 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 ZFHX2Q9C0A1 2572 aaPredicted RBP7.61□□□□□ -1.19
LINC00173-202ENST00000477702 RFX7Q2KHR2 1363 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 MYBBP1AQ9BQG0 1328 aaKnown RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 SLC15A5A6NIM6 579 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 APAF1O14727 1248 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 ERC2O15083 957 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 XYLBO75191 536 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 SASH3O75995 380 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 GLRX3O76003 335 aaKnown RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 WFS1O76024 890 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 IFIT1P09914 478 aaKnown RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 ACRP10323 421 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 TARSP26639 723 aaKnown RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 HOXA7P31268 230 aaPredicted RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 CAP2P40123 477 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 MARSP56192 900 aaKnown RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 BACE1P56817 501 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 JAG1P78504 1218 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 CALD1Q05682 793 aaKnown RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 SHROOM1Q2M3G4 852 aaPredicted RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 FAM47AQ5JRC9 791 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 TMEM240Q5SV17 173 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 PRAMEF19Q5SWL8 479 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 TMCO4Q5TGY1 634 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 SLC44A5Q8NCS7 719 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 KLHDC4Q8TBB5 520 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 IRF7Q92985 503 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 SUCLG2Q96I99 432 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 OSBPL5Q9H0X9 879 aaPredicted RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 CD320Q9NPF0 282 aa7.6□□□□□ -1.19
LINC00173-202ENST00000477702 C9orf78Q9NZ63 289 aaPredicted RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 YBX2Q9Y2T7 364 aaKnown RBP7.6□□□□□ -1.19
LINC00173-202ENST00000477702 PI4K2BG5E9Z4 385 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 RFXAPO00287 272 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 CNMDO75829 334 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 BMP4P12644 408 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 EPB42P16452 691 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 MX2P20592 715 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 BTDP43251 543 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 FAAP100Q0VG06 881 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 LAMC2Q13753 1193 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 PUM3Q15397 648 aaKnown RBP7.59□□□□□ -1.19
LINC00173-202ENST00000477702 GJD3Q8N144 294 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 BHMTQ93088 406 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 KAZALD1Q96I82 304 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 WDR18Q9BV38 432 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 SLC28A3Q9HAS3 691 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 AS3MTQ9HBK9 375 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 DCTN4Q9UJW0 460 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 CFAP54Q96N23 3096 aa7.59□□□□□ -1.19
LINC00173-202ENST00000477702 CACNA1GO43497 2377 aa7.59□□□□□ -1.2
LINC00173-202ENST00000477702 GAKO14976 1311 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 SEPT4O43236 478 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 NDUFB5O43674 189 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 PGK1P00558 417 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 TIMP1P01033 207 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 IGHA2P01877 340 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 HOXC6P09630 235 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 MYOGP15173 224 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 CSF2RAP15509 400 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 NFKB1P19838 968 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 FGFR2P21802 821 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 RABGGTBP53611 331 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
LINC00173-202ENST00000477702 CCNA1P78396 465 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 CCINQ13939 588 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 GRB14Q14449 540 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 RAB30Q15771 203 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
LINC00173-202ENST00000477702 RASIP1Q5U651 963 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 KRT40Q6A162 431 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 ZNF365Q70YC5 407 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 TMC7Q7Z402 723 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 DPP9Q86TI2 863 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 DZIP1Q86YF9 867 aaKnown RBP7.58□□□□□ -1.2
LINC00173-202ENST00000477702 HERVK_113Q902F9 699 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 FAM13BQ9NYF5 915 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 TMEM63CQ9P1W3 806 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 KLF15Q9UIH9 416 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 BRWD1Q9NSI6 2320 aa7.58□□□□□ -1.2
LINC00173-202ENST00000477702 A0A1W2PQ45 241 aaPredicted RBP7.57□□□□□ -1.2
LINC00173-202ENST00000477702 A0A1W2PQY0 241 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 DCDC2CA8MYV0 355 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 PRR33A8MZF0 331 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 GPR182O15218 404 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 GDF11O95390 407 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 SLC5A1P13866 664 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 MFAP1P55081 439 aaKnown RBP7.57□□□□□ -1.2
LINC00173-202ENST00000477702 PPIGQ13427 754 aaKnown RBP eCLIP7.57□□□□□ -1.2
LINC00173-202ENST00000477702 ZYXQ15942 572 aaKnown RBP7.57□□□□□ -1.2
LINC00173-202ENST00000477702 MFSD5Q6N075 450 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 ANKS1AQ92625 1134 aa7.57□□□□□ -1.2
LINC00173-202ENST00000477702 BICC1Q9H694 974 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms