RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 NWD1Q149M9 1564 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 CRKP46108 304 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 TNNC1P63316 161 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 ZBED6P86452 979 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 MAN2A1Q16706 1144 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 ADGRF4Q8IZF3 695 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 FAM76AQ8TAV0 307 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-204ENST00000477421 CUEDC2Q9H467 287 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 ADD3Q9UEY8 706 aaKnown RBP12.15□□□□□ -0.46
COL27A1-204ENST00000477421 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 FLT1P17948 1338 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 KDM3AQ9Y4C1 1321 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 LGALS16A8MUM7 142 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 FOXP2O15409 715 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 BMP3P12645 472 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 CTNNA2P26232 953 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 C2orf54Q08AI8 447 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 CTTNQ14247 550 aaKnown RBP12.15□□□□□ -0.46
COL27A1-204ENST00000477421 BRD3Q15059 726 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 PKN1Q16512 942 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 CFAP221Q4G0U5 840 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 LRCH2Q5VUJ6 765 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 ANKRD40Q6AI12 368 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 TTC19Q6DKK2 380 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-204ENST00000477421 LMBR1Q8WVP7 490 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 AGPAT5Q9NUQ2 364 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 CTTNBP2NLQ9P2B4 639 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 BCL9O00512 1426 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 TUBBP07437 444 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 SEPT7Q16181 437 aaKnown RBP12.15□□□□□ -0.46
COL27A1-204ENST00000477421 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 CAMTA1Q9Y6Y1 1673 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 GOLGA6CA6NDK9 693 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 SPOPO43791 374 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 OPA1O60313 960 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 LRRN2O75325 713 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 GOLGA6DP0CG33 693 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 TUBB4BP68371 445 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 TUBB2AQ13885 445 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 DAAM2Q86T65 1068 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 TUBB2BQ9BVA1 445 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 TRIM9Q9C026 710 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 GOLGA6AQ9NYA3 693 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 ANKRD62A6NC57 917 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
COL27A1-204ENST00000477421 FLOT1O75955 427 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
COL27A1-204ENST00000477421 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 CETN2P41208 172 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 STAT1P42224 750 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 QRICH1Q2TAL8 776 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 SH2D3AQ9BRG2 576 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 PCIF1Q9H4Z3 704 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 ABCB6Q9NP58 842 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 FAM205AQ6ZU69 1335 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 A0A1B0GTH6 734 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 KIF11P52732 1056 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 PLCB3Q01970 1234 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 NR1I3Q14994 352 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 CCDC50Q8IVM0 306 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 GSPT2Q8IYD1 628 aaKnown RBP12.14□□□□□ -0.47
COL27A1-204ENST00000477421 AFAP1L1Q8TED9 768 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 THAP9Q9H5L6 903 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 SH3GLB2Q9NR46 395 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 COL4A3BPQ9Y5P4 624 aa12.14□□□□□ -0.47
COL27A1-204ENST00000477421 A0A087X0B3 334 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 ZBTB5O15062 677 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 VWA3BQ502W6 1294 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 KCTD16Q68DU8 428 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 MIER3Q7Z3K6 550 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 SLFN12Q8IYM2 578 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 F5H6K3 240 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 CHRNA5P30532 468 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 KLK7P49862 253 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 ATP1A2P50993 1020 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 KLRC3Q07444 240 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 GRIK5Q16478 980 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 AOC3Q16853 763 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 MTMR4Q9NYA4 1195 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 ATP6V0A2Q9Y487 856 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 GYPCP04921 128 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 RDXP35241 583 aaKnown RBP12.13□□□□□ -0.47
COL27A1-204ENST00000477421 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 NIM1KQ8IY84 436 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 MLXIPQ9HAP2 919 aa12.13□□□□□ -0.47
COL27A1-204ENST00000477421 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 254.6 ms