RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 ANKRD33Q7Z3H0 272 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 TRIM22Q8IYM9 498 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 CDHR1Q96JP9 859 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 INPP4AQ96PE3 977 aaPredicted RBP14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 ZMYND12Q9H0C1 365 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 PDGFCQ9NRA1 345 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 CEP290O15078 2479 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 MCM3APO60318 1980 aa14.2□□□□□ -0.14
CLCNKA-205ENST00000477360 STXBP3O00186 592 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 DYNC1LI2O43237 492 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 GH1P01241 217 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 ASGR1P07306 291 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 TXNP10599 105 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 GNA11P29992 359 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 NAPAP54920 295 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 LAMC2Q13753 1193 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 LRRC26Q2I0M4 334 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 NOL8Q76FK4 1167 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 EEPD1Q7L9B9 569 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 RAB11FIP4Q86YS3 637 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 CCDC82Q8N4S0 544 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 SLC43A3Q8NBI5 491 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 GIMAP8Q8ND71 665 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 CCDC148Q8NFR7 591 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 BICD2Q8TD16 824 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 SENP7Q9BQF6 1050 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 STARD7Q9NQZ5 370 aa14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 DDX41Q9UJV9 622 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 NAP1L2Q9ULW6 460 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-205ENST00000477360 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 A0A1W2PPC1 479 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 CPLX1O14810 134 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 PFKFB2O60825 505 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 DEXIO95424 95 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 HOXD8P13378 290 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 CDK7P50613 346 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 ADCY7P51828 1080 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 PKN1Q16512 942 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 GALNT17Q6IS24 598 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 USP17L6PQ6QN14 398 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 FCHSD1Q86WN1 690 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 PIBF1Q8WXW3 757 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 LENG1Q96BZ8 264 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 GPRASP2Q96D09 838 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 TBC1D32Q96NH3 1257 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 C22orf23Q9BZE7 217 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 MRVI1Q9Y6F6 885 aa14.18□□□□□ -0.14
CLCNKA-205ENST00000477360 STK36Q9NRP7 1315 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 SMCO2A6NFE2 343 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 SPATA31C2B4DYI2 1134 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 H0YGN5 161 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 FIBPO43427 364 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 RGS20O76081 388 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 CLK2P49760 499 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 RTP1P59025 263 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 MRPS9P82933 396 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 ARHGAP1Q07960 439 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 NEDD9Q14511 834 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 NLRX1Q86UT6 975 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 OR6J1Q8NGC5 347 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 PPTC7Q8NI37 304 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
CLCNKA-205ENST00000477360 MYADML2A6NDP7 307 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 ARVCFO00192 962 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 PPFIA4O75335 1185 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 MYCLP12524 364 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 BMP8BP34820 402 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 NEK4P51957 841 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 AK2P54819 239 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 PURAQ00577 322 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 PTPN11Q06124 597 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 SEPT14Q6ZU15 432 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 NIPA1Q7RTP0 329 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 MTG1Q9BT17 334 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 SLKQ9H2G2 1235 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 PCDHA6Q9UN73 950 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 PCDHA8Q9Y5H6 950 aa14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 DDX49Q9Y6V7 483 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-205ENST00000477360 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 DCDC2CA8MYV0 355 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 ARIH2O95376 493 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 SREBF1P36956 1147 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 DGKDQ16760 1214 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 CELF3Q5SZQ8 465 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 MYSM1Q5VVJ2 828 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 NFRKBQ6P4R8 1299 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 METTL7BQ6UX53 244 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 IL31RAQ8NI17 732 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 WASF1Q92558 559 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 FERMT2Q96AC1 680 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 SLC26A6Q9BXS9 759 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 PRO3102Q9H379 93 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 PRKAG2Q9UGJ0 569 aa14.15□□□□□ -0.14
CLCNKA-205ENST00000477360 TPCN1Q9ULQ1 816 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms