RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	TRIT1	Q9H3H1	467 aa	Known RBP	5.81	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.81	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	COL3A1	P02461	1466 aa	Predicted RBP	5.81	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	THSD7A	Q9UPZ6	1657 aa		5.81	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	NCAPD2	Q15021	1401 aa		5.81	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	KAT6B	Q8WYB5	2073 aa		5.81	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	RGPD2	P0DJD1	1756 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	APAF1	O14727	1248 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	CYP27B1	O15528	508 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	FOXD2	O60548	495 aa	Predicted RBP	5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	TMPO	P42166	694 aa	Known RBP	5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	EGR3	Q06889	387 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	SLFN12	Q8IYM2	578 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	SLC52A2	Q9HAB3	445 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	GPATCH2	Q9NW75	528 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	REV1	Q9UBZ9	1251 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	DUSP13	Q9UII6	198 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	LAS1L	Q9Y4W2	734 aa	Known RBP	5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	LRRC37A3	O60309	1634 aa		5.8	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	WNK3	Q9BYP7	1800 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289		A0A0G2JLL6	359 aa	Predicted RBP	5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	CHURC1-FNTB	B4DL54	471 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	DNAJA2	O60884	412 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	BPNT1	O95861	308 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	ZGLP1	P0C6A0	271 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	YARS	P54577	528 aa	Known RBP	5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	GNAI1	P63096	354 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	TAF7	Q15545	349 aa	Predicted RBP	5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	RNF141	Q8WVD5	230 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	CRELD1	Q96HD1	420 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	PHACTR3	Q96KR7	559 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	TMEM74	Q96NL1	305 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	PLEKHF1	Q96S99	279 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	RSRP1	Q9BUV0	290 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	TEX13A	Q9BXU3	409 aa	Predicted RBP	5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	RNF32	Q9H0A6	362 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	ZCCHC4	Q9H5U6	513 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	RRP7A	Q9Y3A4	280 aa	Known RBP	5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	PCDHA11	Q9Y5I1	949 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	BCL9	O00512	1426 aa		5.79	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	PLSCR1	O15162	318 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	RGPD1	P0DJD0	1748 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	BMP7	P18075	431 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	GART	P22102	1010 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	CCDC184	Q52MB2	194 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	TIGD5	Q53EQ6	642 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	DBX2	Q6ZNG2	339 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	MCM10	Q7L590	875 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	KREMEN1	Q96MU8	473 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	MYH16	Q9H6N6	1097 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	BABAM1	Q9NWV8	329 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	STK32B	Q9NY57	414 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	TSPYL4	Q9UJ04	414 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	CCNL1	Q9UK58	526 aa	Predicted RBP	5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	KCNH3	Q9ULD8	1083 aa		5.78	□□□□□ -1.48
NSMCE4A-208	ENST00000477289	PKD1L3	Q7Z443	1732 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	BRWD3	Q6RI45	1802 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	RBM47	A0AV96	593 aa	Known RBP	5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SHISA3	A0PJX4	238 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KCNQ2	O43526	872 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	GRIN3B	O60391	1043 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SORBS3	O60504	671 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	HTR3B	O95264	441 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	STARD3NL	O95772	234 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	GBP2	P32456	591 aa	Predicted RBP	5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	FAM160A1	Q05DH4	1040 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	CCDC27	Q2M243	656 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	PDZD8	Q8NEN9	1154 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	FBXO27	Q8NI29	283 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	PIGB	Q92521	554 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	VWCE	Q96DN2	955 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	EBF1	Q9UH73	591 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KLHL3	Q9UH77	587 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	PALLD	Q8WX93	1383 aa		5.77	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	DCTN1	Q14203	1278 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	TXNRD1	Q16881	649 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	ZNF790	Q6PG37	636 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	RELL1	Q8IUW5	271 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	WDR63	Q8IWG1	891 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	IL17RE	Q8NFR9	667 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	CCDC74B	Q96LY2	380 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	IFT57	Q9NWB7	429 aa		5.76	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	MINDY4B	A8MYZ0	360 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SNRPA1	P09661	255 aa	Known RBP	5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	PDIA4	P13667	645 aa	Known RBP	5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	SYN1	P17600	705 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	TNNI2	P48788	182 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	TEK	Q02763	1124 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	MPP2	Q14168	576 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	NR0B2	Q15466	257 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	EZH2	Q15910	746 aa	Known RBP	5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	REC114	Q7Z4M0	266 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	DEFB132	Q7Z7B7	95 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	GOLM1	Q8NBJ4	401 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KCNC2	Q96PR1	638 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	KIF2C	Q99661	725 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	ASPN	Q9BXN1	380 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	TFCP2L1	Q9NZI6	479 aa		5.75	□□□□□ -1.49
NSMCE4A-208	ENST00000477289	ASAP1	Q9ULH1	1129 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms