RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ERC1Q8IUD2 1116 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 TLR9Q9NR96 1032 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 ADD3Q9UEY8 706 aaKnown RBP18.26■□□□□ 0.51
SMG5-204ENST00000476954 CSPG5O95196 566 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 AMHP03971 560 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 TXNP10599 105 aaKnown RBP18.25■□□□□ 0.51
SMG5-204ENST00000476954 SLC1A4P43007 532 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 SMAD4Q13485 552 aaKnown RBP18.25■□□□□ 0.51
SMG5-204ENST00000476954 PKN1Q16512 942 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 CEP85Q6P2H3 762 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
SMG5-204ENST00000476954 DBF4BQ8NFT6 615 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 AFG1LQ8WV93 481 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 SAMD11Q96NU1 681 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■■■□□ 18.8
SMG5-204ENST00000476954 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
SMG5-204ENST00000476954 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
SMG5-204ENST00000476954 NKRFO15226 690 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■□□□□ 10.5
SMG5-204ENST00000476954 PARNO95453 639 aaKnown RBP18.24■□□□□ 0.51
SMG5-204ENST00000476954 CALML3P27482 149 aa18.24■□□□□ 0.51
SMG5-204ENST00000476954 ZNF200P98182 395 aaPredicted RBP18.24■□□□□ 0.51
SMG5-204ENST00000476954 SCFD2Q8WU76 684 aa18.24■□□□□ 0.51
SMG5-204ENST00000476954 GMCL1Q96IK5 515 aa18.24■□□□□ 0.51
SMG5-204ENST00000476954 STRBPQ96SI9 672 aaKnown RBP18.24■□□□□ 0.51
SMG5-204ENST00000476954 IGFLR1Q9H665 355 aa18.24■□□□□ 0.51
SMG5-204ENST00000476954 SYNPO2Q9UMS6 1093 aa18.24■□□□□ 0.51
SMG5-204ENST00000476954 EPG5Q9HCE0 2579 aa18.24■□□□□ 0.51
SMG5-204ENST00000476954 GRM6O15303 877 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 UPP2O95045 317 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 MMP3P08254 477 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 AVPR2P30518 371 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 PDE4BQ07343 736 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 PDE4DQ08499 809 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 YME1L1Q96TA2 773 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 ALG1Q9BT22 464 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 OSBPL7Q9BZF2 842 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 EPB41L4AQ9HCS5 686 aaPredicted RBP18.23■□□□□ 0.51
SMG5-204ENST00000476954 GTF2IRD1Q9UHL9 959 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 CD207Q9UJ71 328 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 MTMR7Q9Y216 660 aa18.23■□□□□ 0.51
SMG5-204ENST00000476954 ICAM1P05362 532 aa18.22■□□□□ 0.51
SMG5-204ENST00000476954 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
SMG5-204ENST00000476954 HIC1Q14526 733 aa18.22■□□□□ 0.51
SMG5-204ENST00000476954 ERMP1Q7Z2K6 904 aa18.22■□□□□ 0.51
SMG5-204ENST00000476954 NEDD1Q8NHV4 660 aa18.22■□□□□ 0.51
SMG5-204ENST00000476954 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
SMG5-204ENST00000476954 MYO15AQ9UKN7 3530 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 PRR23AA6NEV1 266 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 PROB1E7EW31 1015 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 PLA2G6O60733 806 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 PDGFBP01127 241 aaPredicted RBP18.21■□□□□ 0.51
SMG5-204ENST00000476954 EDNRBP24530 442 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 RCSD1Q6JBY9 416 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 CHST3Q7LGC8 479 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 ASIC4Q96FT7 647 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 DCHS1Q96JQ0 3298 aa18.21■□□□□ 0.51
SMG5-204ENST00000476954 PLIN4Q96Q06 1357 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 LOC730098B7Z3J9 87 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 NCK2O43639 380 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 TSPY3P0CV98 308 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 TSPY8P0CW00 308 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 RLBP1P12271 317 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 CTNNB1P35222 781 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 SLC16A2P36021 539 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 ARHGAP1Q07960 439 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 PTK7Q13308 1070 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 ZKSCAN2Q63HK3 967 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 TTBK2Q6IQ55 1244 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 CCDC62Q6P9F0 684 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 ITPRIPQ8IWB1 547 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 CLASRPQ8N2M8 674 aaKnown RBP18.2■□□□□ 0.5
SMG5-204ENST00000476954 C7orf31Q8N865 590 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 CLEC4DQ8WXI8 215 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 HAUS7Q99871 368 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 TRPC6Q9Y210 931 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 NCOR2Q9Y618 2525 aa18.2■□□□□ 0.5
SMG5-204ENST00000476954 WDR87Q6ZQQ6 2873 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 LOC102724159A0A0B4J2E5 919 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 ATP5JP18859 108 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 ID4P47928 161 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 PSEN2P49810 448 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 TFAP4Q01664 338 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 SIGLEC14Q08ET2 396 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 PWP2Q15269 919 aaKnown RBP18.19■□□□□ 0.5
SMG5-204ENST00000476954 LY6KQ17RY6 165 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 MSLNLQ96KJ4 702 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 RANBP17Q9H2T7 1088 aaKnown RBP18.19■□□□□ 0.5
SMG5-204ENST00000476954 MYH7BA7E2Y1 1941 aa18.19■□□□□ 0.5
SMG5-204ENST00000476954 KIAA1217Q5T5P2 1943 aa18.18■□□□□ 0.5
SMG5-204ENST00000476954 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.18■□□□□ 0.5
SMG5-204ENST00000476954 LINC00271P0C7V0 271 aa18.18■□□□□ 0.5
SMG5-204ENST00000476954 ADAM15Q13444 863 aa18.18■□□□□ 0.5
SMG5-204ENST00000476954 PLEKHG4Q58EX7 1191 aa18.18■□□□□ 0.5
SMG5-204ENST00000476954 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
SMG5-204ENST00000476954 INCENPQ9NQS7 918 aa18.18■□□□□ 0.5
SMG5-204ENST00000476954 ZNF292O60281 2723 aa18.17■□□□□ 0.5
SMG5-204ENST00000476954 CACNA1GO43497 2377 aa18.17■□□□□ 0.5
SMG5-204ENST00000476954 NMT2O60551 498 aa18.17■□□□□ 0.5
SMG5-204ENST00000476954 KDM4AO75164 1064 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms