RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 CEP290O15078 2479 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 CTAGE5O15320 804 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 DTNBO60941 627 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 CDKL5O76039 1030 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 RGS20O76081 388 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 ARIH2O95376 493 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 DEXIO95424 95 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 CTDNEP1O95476 244 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 TXNP10599 105 aaKnown RBP24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 NKX3-2P78367 333 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 TTLL4Q14679 1199 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 RABEP1Q15276 862 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 CCSAPQ6IQ19 270 aaPredicted RBP24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 CCDC62Q6P9F0 684 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 TLK2Q86UE8 772 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 TEX2Q8IWB9 1127 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 GTF3C6Q969F1 213 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 HTATIP2Q9BUP3 242 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 AP5M1Q9H0R1 490 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 GLT8D2Q9H1C3 349 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 LIMCH1Q9UPQ0 1083 aa24.08■■□□□ 1.45
MAP1LC3A-204ENST00000476428 ESYT2A0FGR8 921 aa24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 SPDYE3A6NKU9 549 aa24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 CST5P28325 142 aaPredicted RBP24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 MRPS9P82933 396 aaKnown RBP24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 KCNA10Q16322 511 aa24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 CCDC12Q8WUD4 166 aaPredicted RBP24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 COPS5Q92905 334 aa24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 TSEN34Q9BSV6 310 aaKnown RBP24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ZMYND12Q9H0C1 365 aa24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 VPS54Q9P1Q0 977 aa24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 PHF24Q9UPV7 400 aa24.07■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ADAMTS3O15072 1205 aa24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 NKRFO15226 690 aaKnown RBP eCLIP24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 BEX3Q00994 111 aa24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 GNASQ5JWF2 1037 aa24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 FERMT2Q96AC1 680 aa24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 C6orf50Q9HD87 102 aa24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 TMEM260Q9NX78 707 aa24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 RTEL1Q9NZ71 1219 aa24.06■■□□□ 1.44
MAP1LC3A-204ENST00000476428 LRRC37A2A6NM11 1700 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 TRIOBPQ9H2D6 2365 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 H0YGN5 161 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 CLK2P49760 499 aaKnown RBP24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 LY6KQ17RY6 165 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 PCNX4Q63HM2 1172 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 XRRA1Q6P2D8 792 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 DPF3Q92784 378 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 PGBD1Q96JS3 809 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 AIFM3Q96NN9 605 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 SH3GLB2Q9NR46 395 aa24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 DDX41Q9UJV9 622 aaKnown RBP24.05■■□□□ 1.44
MAP1LC3A-204ENST00000476428 FOSP01100 380 aaPredicted RBP24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ACLYP53396 1101 aa24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ST3GAL1Q11201 340 aa24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 FSCN1Q16658 493 aaKnown RBP24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 JAKMIP3Q5VZ66 844 aa24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 PCSK9Q8NBP7 692 aaKnown RBP24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 CCDC148Q8NFR7 591 aa24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 OR6J1Q8NGC5 347 aa24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 MRVI1Q9Y6F6 885 aa24.04■■□□□ 1.44
MAP1LC3A-204ENST00000476428 MOXD2PA6NHM9 499 aa24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 STAM2O75886 525 aa24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 GNA11P29992 359 aa24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ATN1P54259 1190 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ZSCAN31Q96LW9 406 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 INPP4AQ96PE3 977 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ANO3Q9BYT9 981 aa24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 EHMT1Q9H9B1 1298 aa24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 STK36Q9NRP7 1315 aa24.03■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ASGR1P07306 291 aa24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 FDPSP14324 419 aaKnown RBP24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 NLRP5P59047 1200 aa24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 AP3B2Q13367 1082 aa24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 LRRC26Q2I0M4 334 aa24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 KCNV1Q6PIU1 500 aa24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 SLC39A5Q6ZMH5 540 aa24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 NSUN7Q8NE18 718 aaKnown RBP24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 ORC3Q9UBD5 711 aaPredicted RBP24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 FRMPD3Q5JV73 1810 aa24.02■■□□□ 1.44
MAP1LC3A-204ENST00000476428 A0A1W2PQ45 241 aaPredicted RBP24.01■■□□□ 1.43
MAP1LC3A-204ENST00000476428 A0A1W2PQY0 241 aa24.01■■□□□ 1.43
MAP1LC3A-204ENST00000476428 GH1P01241 217 aa24.01■■□□□ 1.43
MAP1LC3A-204ENST00000476428 ICAM3P32942 547 aa24.01■■□□□ 1.43
MAP1LC3A-204ENST00000476428 ARHGAP1Q07960 439 aa24.01■■□□□ 1.43
MAP1LC3A-204ENST00000476428 GNPTABQ3T906 1256 aa24.01■■□□□ 1.43
MAP1LC3A-204ENST00000476428 SPATA31C2B4DYI2 1134 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 ST18O60284 1047 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 ZEB2O60315 1214 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 TGFB3P10600 412 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 SP2Q02086 613 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 CCDC83Q8IWF9 413 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 REXO1Q8N1G1 1221 aaKnown RBP24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 IL27Q8NEV9 243 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 BICD2Q8TD16 824 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 RASGRP4Q8TDF6 673 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 UBIAD1Q9Y5Z9 338 aa24■■□□□ 1.43
MAP1LC3A-204ENST00000476428 EVI5O60447 810 aa23.99■■□□□ 1.43
MAP1LC3A-204ENST00000476428 JAK2O60674 1132 aa23.99■■□□□ 1.43
MAP1LC3A-204ENST00000476428 SEMA3FQ13275 785 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms