RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
NME1-206ENST00000475573 GTF2IRD1Q9UHL9 959 aa17.96■□□□□ 0.47
NME1-206ENST00000475573 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
NME1-206ENST00000475573 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
NME1-206ENST00000475573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
NME1-206ENST00000475573 C5orf42Q9H799 3197 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 USP34Q70CQ2 3546 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 NMT2O60551 498 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 SLC16A2P36021 539 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 NOVP48745 357 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 HTRA4P83105 476 aaPredicted RBP17.95■□□□□ 0.46
NME1-206ENST00000475573 TTBK2Q6IQ55 1244 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 CCDC62Q6P9F0 684 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 BANK1Q8NDB2 785 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 SP7Q8TDD2 431 aaPredicted RBP17.95■□□□□ 0.46
NME1-206ENST00000475573 KAT2BQ92831 832 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
NME1-206ENST00000475573 KIAA1217Q5T5P2 1943 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 COL4A6Q14031 1691 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 GH1P01241 217 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 AMHP03971 560 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 CASTP20810 708 aaKnown RBP17.94■□□□□ 0.46
NME1-206ENST00000475573 PTK7Q13308 1070 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 EPC2Q52LR7 807 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 NLRC5Q86WI3 1866 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 EMSYQ7Z589 1322 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 WDR19Q8NEZ3 1342 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 MYO7AQ13402 2215 aa17.94■□□□□ 0.46
NME1-206ENST00000475573 TECTAO75443 2155 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 SMARCA5O60264 1052 aaPredicted RBP17.93■□□□□ 0.46
NME1-206ENST00000475573 LGR5O75473 907 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 ARHGAP1Q07960 439 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 MKRN4PQ13434 485 aaPredicted RBP17.93■□□□□ 0.46
NME1-206ENST00000475573 TCEAL5Q5H9L2 206 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 TRAF7Q6Q0C0 670 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.93■□□□□ 0.467e-7■■■□□ 17
NME1-206ENST00000475573 C7orf31Q8N865 590 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 KATNAL1Q9BW62 490 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 NSUN3Q9H649 340 aaKnown RBP17.93■□□□□ 0.46
NME1-206ENST00000475573 HDAC6Q9UBN7 1215 aa17.93■□□□□ 0.46
NME1-206ENST00000475573 RALGAPA2Q2PPJ7 1873 aa17.92■□□□□ 0.46
NME1-206ENST00000475573 H3BNC9 293 aa17.92■□□□□ 0.46
NME1-206ENST00000475573 MBTPS1Q14703 1052 aa17.92■□□□□ 0.46
NME1-206ENST00000475573 DGKDQ16760 1214 aa17.92■□□□□ 0.46
NME1-206ENST00000475573 TRIM71Q2Q1W2 868 aaKnown RBP17.92■□□□□ 0.46
NME1-206ENST00000475573 ZNF618Q5T7W0 954 aa17.92■□□□□ 0.46
NME1-206ENST00000475573 EP400NLQ6ZTU2 488 aa17.92■□□□□ 0.46
NME1-206ENST00000475573 MYOCDQ8IZQ8 938 aa17.92■□□□□ 0.46
NME1-206ENST00000475573 POP1Q99575 1024 aaKnown RBP17.92■□□□□ 0.46
NME1-206ENST00000475573 IRS1P35568 1242 aa17.91■□□□□ 0.46
NME1-206ENST00000475573 PSEN2P49810 448 aa17.91■□□□□ 0.46
NME1-206ENST00000475573 GPM6BQ13491 265 aa17.91■□□□□ 0.46
NME1-206ENST00000475573 HERC4Q5GLZ8 1057 aaPredicted RBP17.91■□□□□ 0.46
NME1-206ENST00000475573 CHMP4BQ9H444 224 aaKnown RBP17.91■□□□□ 0.46
NME1-206ENST00000475573 CFAP54Q96N23 3096 aa17.91■□□□□ 0.46
NME1-206ENST00000475573 FRMPD2Q68DX3 1309 aaPredicted RBP17.91■□□□□ 0.46
NME1-206ENST00000475573 ATG2AQ2TAZ0 1938 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 NCK2O43639 380 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 RANBP6O60518 1105 aaKnown RBP17.9■□□□□ 0.46
NME1-206ENST00000475573 F2P00734 622 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 TOP1P11387 765 aaKnown RBP17.9■□□□□ 0.46
NME1-206ENST00000475573 LY6KQ17RY6 165 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 ANKS1AQ92625 1134 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 WNT8BQ93098 351 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 EMID1Q96A84 441 aaPredicted RBP17.9■□□□□ 0.46
NME1-206ENST00000475573 YME1L1Q96TA2 773 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 SEC62Q99442 399 aaKnown RBP17.9■□□□□ 0.46
NME1-206ENST00000475573 GPCPD1Q9NPB8 672 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 CLDND1Q9NY35 253 aa17.9■□□□□ 0.46
NME1-206ENST00000475573 ST18O60284 1047 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 PTPN5P54829 565 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 CTDSPL2Q05D32 466 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 MFSD10Q14728 455 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 SMAD2Q15796 467 aaKnown RBP17.89■□□□□ 0.45
NME1-206ENST00000475573 TSHZ3Q63HK5 1081 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 SEPT14Q6ZU15 432 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 RPAINQ86UA6 219 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 FBXO11Q86XK2 927 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 DBF4BQ8NFT6 615 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 PHOX2BQ99453 314 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 ALG1Q9BT22 464 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 MAF1Q9H063 256 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 MUTYHQ9UIF7 546 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 ZDBF2Q9HCK1 2354 aa17.89■□□□□ 0.45
NME1-206ENST00000475573 HAS3O00219 553 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 ORC4O43929 436 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 PDHBP11177 359 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 TMEM192Q8IY95 271 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 PRSS33Q8NF86 280 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 PRRX2Q99811 253 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 INCENPQ9NQS7 918 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 ANAPC4Q9UJX5 808 aa17.88■□□□□ 0.45
NME1-206ENST00000475573 ZNF286BP0CG31 522 aa17.87■□□□□ 0.45
NME1-206ENST00000475573 LTBRP36941 435 aa17.87■□□□□ 0.45
NME1-206ENST00000475573 CTC1Q2NKJ3 1217 aa17.87■□□□□ 0.45
NME1-206ENST00000475573 PLEKHG4Q58EX7 1191 aa17.87■□□□□ 0.45
NME1-206ENST00000475573 ZMYM1Q5SVZ6 1142 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms