RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 PPP4R3AQ6IN85 833 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 FAM160B2Q86V87 743 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.65
ITGA6-210ENST00000475302 SPATA20Q8TB22 786 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 LPAR1Q92633 364 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
ITGA6-210ENST00000475302 CUL5Q93034 780 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 HOOK2Q96ED9 719 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 C12orf42Q96LP6 360 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 GLT8D2Q9H1C3 349 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 ZNF536O15090 1300 aa10.98□□□□□ -0.65
ITGA6-210ENST00000475302 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L15C9J2P7 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L13C9JLJ4 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L11C9JVI0 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L18D6R9N7 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L22D6RA61 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L17D6RBQ6 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L19D6RCP7 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L20D6RJB6 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 WDR46O15213 610 aaKnown RBP10.97□□□□□ -0.65
ITGA6-210ENST00000475302 FOXN1O15353 648 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 LONP1P36776 959 aaKnown RBP10.97□□□□□ -0.65
ITGA6-210ENST00000475302 STAT2P52630 851 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L24Q0WX57 530 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 IQCB1Q15051 598 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 UBE2SQ16763 222 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 USP17L6PQ6QN14 398 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 DLK2Q6UY11 383 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 RNF214Q8ND24 703 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 CHURC1Q8WUH1 139 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 ERCC4Q92889 916 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-210ENST00000475302 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-210ENST00000475302 SDF4Q9BRK5 362 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 CCSER1Q9C0I3 900 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 FBXO28Q9NVF7 368 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 FAM13BQ9NYF5 915 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 SERTAD1Q9UHV2 236 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 FEM1BQ9UK73 627 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 FZD1Q9UP38 647 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 RLFQ13129 1914 aa10.97□□□□□ -0.65
ITGA6-210ENST00000475302 POLR2AP24928 1970 aaKnown RBP10.96□□□□□ -0.65
ITGA6-210ENST00000475302 PARP14Q460N5 1801 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 VWA3AA6NCI4 1184 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 POLR2DO15514 142 aaKnown RBP10.96□□□□□ -0.65
ITGA6-210ENST00000475302 AP5Z1O43299 807 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 CAVIN2O95810 425 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 TAL1P17542 331 aaPredicted RBP10.96□□□□□ -0.65
ITGA6-210ENST00000475302 NDUFV2P19404 249 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 USP11P51784 963 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 BACE1P56817 501 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 DGKZQ13574 1117 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 Q3C1V9 767 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 SUPT20HL1Q3ZLR7 823 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 ANO6Q4KMQ2 910 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 PDXDC2PQ6P474 469 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
ITGA6-210ENST00000475302 C11orf57Q6ZUT1 292 aaPredicted RBP10.96□□□□□ -0.65
ITGA6-210ENST00000475302 IGSF22Q8N9C0 903 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 HAS1Q92839 578 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 MMTAG2Q9BU76 263 aaKnown RBP10.96□□□□□ -0.65
ITGA6-210ENST00000475302 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
ITGA6-210ENST00000475302 PCDHGC3Q9UN70 934 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 ADAMTS5Q9UNA0 930 aa10.96□□□□□ -0.65
ITGA6-210ENST00000475302 A0A087WWV3 80 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 GLTPD2A6NH11 291 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 MOXD2PA6NHM9 499 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 SLC37A4O43826 429 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 RAD21O60216 631 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 TDP2O95551 362 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 CYP3A4P08684 503 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 OR52Z1P0C646 297 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 SLFN14P0C7P3 912 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 BMP6P22004 513 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 CIITAP33076 1130 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 SPP2Q13103 211 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 AP3B2Q13367 1082 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 LETM2Q2VYF4 491 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 NAALADL2Q58DX5 795 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 SH3D19Q5HYK7 790 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 MCTP2Q6DN12 878 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 SASS6Q6UVJ0 657 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 MOXD1Q6UVY6 613 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 DTHD1Q6ZMT9 781 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 LIAT1Q6ZQX7 453 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 USP50Q70EL3 339 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-210ENST00000475302 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 LRRC15Q8TF66 581 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 TBC1D5Q92609 795 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 LENG9Q96B70 501 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 PAGE5Q96GU1 130 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 WRNIP1Q96S55 665 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 ANO3Q9BYT9 981 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 CBX8Q9HC52 389 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
ITGA6-210ENST00000475302 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms