RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 LSAMPQ13449 338 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 GIT2Q14161 759 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 GCKRQ14397 625 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 SF3A1Q15459 793 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 GIMAP8Q8ND71 665 aaPredicted RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 WHAMMQ8TF30 809 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CCDC12Q8WUD4 166 aaPredicted RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 OSBP2Q969R2 916 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CCDC47Q96A33 483 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 SLC7A6OSQ96CW6 309 aaPredicted RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 RBM41Q96IZ5 413 aaKnown RBP4.57□□□□□ -1.68
USP16-205ENST00000474835 ARHGEF10LQ9HCE6 1279 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CHPF2Q9P2E5 772 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 CIDEBQ9UHD4 219 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 KCNH3Q9ULD8 1083 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 PCDHA2Q9Y5H9 948 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 RTL9Q8NET4 1388 aa4.57□□□□□ -1.68
USP16-205ENST00000474835 GREB1Q4ZG55 1949 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 ELL2O00472 640 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 ZNF185O15231 689 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 ATP9BO43861 1147 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 PYGBP11216 843 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 ZKSCAN1P17029 563 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 ATP6V1C1P21283 382 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 ERVK-9P63128 1117 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 RASA3Q14644 834 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 CYP1B1Q16678 543 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 RNF43Q68DV7 783 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 TMC3Q7Z5M5 1100 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 STAMBPL1Q96FJ0 436 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 CTAGE1Q96RT6 745 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 OSBPL9Q96SU4 736 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 LRMDAQ9H2I8 198 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 NLRC4Q9NPP4 1024 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 GPHNQ9NQX3 736 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 ARHGEF4Q9NR80 690 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SUN2Q9UH99 717 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SAR1BQ9Y6B6 198 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 EPN1Q9Y6I3 576 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 CAPN7Q9Y6W3 813 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 RPTORQ8N122 1335 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SSU72P8A0A1W2PR75 194 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 GMNCA6NCL1 334 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 GOLGA6BA6NDN3 693 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 DCDC2CA8MYV0 355 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 BUB1BO60566 1050 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 CAPN15O75808 1086 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 CD48P09326 243 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 TPBGLP0DKB5 382 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 COPB1P53618 953 aaKnown RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 OCRLQ01968 901 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 DEUP1Q05D60 604 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 BTKQ06187 659 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SIX1Q15475 284 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 USP49Q70CQ1 688 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SPATA21Q7Z572 469 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 APBB1IPQ7Z5R6 666 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 SMYD1Q8NB12 490 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SLC30A5Q8TAD4 765 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 NRG4Q8WWG1 115 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 LPIN2Q92539 896 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 EZH1Q92800 747 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 PTPRN2Q92932 1015 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 COG3Q96JB2 828 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 GORASP1Q9BQQ3 440 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 TOMM22Q9NS69 142 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 DBF4Q9UBU7 674 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 MYH11P35749 1972 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 DPPA5A6NC42 116 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 O00370 1275 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 ADAMTS3O15072 1205 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 MAFGO15525 162 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 MYL1P05976 194 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 CCND1P24385 295 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 CNGA1P29973 690 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 KRT9P35527 623 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 HSD17B3P37058 310 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SYKP43405 635 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 GUCY2DQ02846 1103 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 PDCLQ13371 301 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 MCM6Q14566 821 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 ADRM1Q16186 407 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 TTC19Q6DKK2 380 aaPredicted RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 CCDC73Q6ZRK6 1079 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP16-205ENST00000474835 ZNF333Q96JL9 665 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 DDX47Q9H0S4 455 aaKnown RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 NCOA5Q9HCD5 579 aaKnown RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 GJB4Q9NTQ9 266 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 HAUS2Q9NVX0 235 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 CNOT7Q9UIV1 285 aaKnown RBP4.56□□□□□ -1.68
USP16-205ENST00000474835 FBXL5Q9UKA1 691 aa4.56□□□□□ -1.68
USP16-205ENST00000474835 NCANO14594 1321 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 KCNQ3O43525 872 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PRC1O43663 620 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 SURF6O75683 361 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 MUTP22033 750 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 EEF1GP26641 437 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 ARID4AP29374 1257 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 IARSP41252 1262 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms