RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 ARHGAP25P42331 645 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 USP14P54578 494 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 KLHL10Q6JEL2 608 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 HHIPL2Q6UWX4 724 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 DLK2Q6UY11 383 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 CYP26C1Q6V0L0 522 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 SECISBP2LQ93073 1101 aaKnown RBP23.6■■□□□ 1.37
SH3D21-202ENST00000474766 TEKT1Q969V4 418 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 LZTS2Q9BRK4 669 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 DEF6Q9H4E7 631 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 ZNF287Q9HBT7 754 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 GAKO14976 1311 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 PASKQ96RG2 1323 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 A0A0U1RQJ8 604 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 TRAF5O00463 557 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 SHOX2O60902 331 aaPredicted RBP23.6■■□□□ 1.37
SH3D21-202ENST00000474766 CASP14P31944 242 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 TADA2BQ86TJ2 420 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 MAPKAPK5Q8IW41 473 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 SMYD4Q8IYR2 804 aaPredicted RBP23.6■■□□□ 1.37
SH3D21-202ENST00000474766 ATRIPQ8WXE1 791 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 BARHL2Q9NY43 387 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 PCDHA6Q9UN73 950 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 PCDHA8Q9Y5H6 950 aa23.6■■□□□ 1.37
SH3D21-202ENST00000474766 GYPCP04921 128 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 STX17P56962 302 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 SWT1Q5T5J6 900 aaKnown RBP23.59■■□□□ 1.37
SH3D21-202ENST00000474766 APOBEC3HQ6NTF7 200 aaKnown RBP23.59■■□□□ 1.37
SH3D21-202ENST00000474766 SAMD1Q6SPF0 538 aaPredicted RBP23.59■■□□□ 1.37
SH3D21-202ENST00000474766 C16orf86Q6ZW13 317 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 NOA1Q8NC60 698 aaKnown RBP23.59■■□□□ 1.37
SH3D21-202ENST00000474766 STAMQ92783 540 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 ZDHHC15Q96MV8 337 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 DDX60LQ5H9U9 1706 aaKnown RBP23.59■■□□□ 1.37
SH3D21-202ENST00000474766 STXBP3O00186 592 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 BTDP43251 543 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 DCPSQ96C86 337 aaKnown RBP23.59■■□□□ 1.37
SH3D21-202ENST00000474766 NCAPGQ9BPX3 1015 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 HPCAL4Q9UM19 191 aa23.59■■□□□ 1.37
SH3D21-202ENST00000474766 ADM5C9JUS6 153 aa23.58■■□□□ 1.37
SH3D21-202ENST00000474766 MMS22LQ6ZRQ5 1243 aa23.58■■□□□ 1.37
SH3D21-202ENST00000474766 TRAPPC11Q7Z392 1133 aa23.58■■□□□ 1.37
SH3D21-202ENST00000474766 KRT26Q7Z3Y9 468 aa23.58■■□□□ 1.37
SH3D21-202ENST00000474766 RASGRP4Q8TDF6 673 aa23.58■■□□□ 1.37
SH3D21-202ENST00000474766 BLZF1Q9H2G9 400 aa23.58■■□□□ 1.37
SH3D21-202ENST00000474766 SAP30BPQ9UHR5 308 aaKnown RBP23.58■■□□□ 1.37
SH3D21-202ENST00000474766 TRPM7Q96QT4 1865 aa23.58■■□□□ 1.37
SH3D21-202ENST00000474766 PITPNM2Q9BZ72 1349 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 CCDC194A0A1B0GVG4 234 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 CLRN2A0PK11 232 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 LRRC10BA6NIK2 292 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 CPLX3Q8WVH0 158 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 SPZ1Q9BXG8 430 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 STX8Q9UNK0 236 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 PHACTR2O75167 634 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 PLCG2P16885 1265 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 CDK8P49336 464 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 FXR1P51114 621 aaKnown RBP eCLIP23.57■■□□□ 1.36
SH3D21-202ENST00000474766 SLF2Q8IX21 1173 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 ACRBPQ8NEB7 543 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 NEDD1Q8NHV4 660 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 COG1Q8WTW3 980 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 ABHD10Q9NUJ1 306 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 LIMA1Q9UHB6 759 aaKnown RBP23.57■■□□□ 1.36
SH3D21-202ENST00000474766 RWDD2AQ9UIY3 292 aa23.57■■□□□ 1.36
SH3D21-202ENST00000474766 ERVK-24P63145 666 aa23.56■■□□□ 1.36
SH3D21-202ENST00000474766 MYCBPQ99417 103 aaPredicted RBP23.56■■□□□ 1.36
SH3D21-202ENST00000474766 TDRD3Q9H7E2 651 aaKnown RBP23.56■■□□□ 1.36
SH3D21-202ENST00000474766 RMND1Q9NWS8 449 aa23.56■■□□□ 1.36
SH3D21-202ENST00000474766 RHBDL3P58872 404 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 SPAG1Q07617 926 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 ZNF658Q5TYW1 1059 aaPredicted RBP23.55■■□□□ 1.36
SH3D21-202ENST00000474766 HEATR3Q7Z4Q2 680 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 CEP89Q96ST8 783 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 CTNND2Q9UQB3 1225 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 KLRF2D3W0D1 207 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 LAD1O00515 517 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 NOVP48745 357 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 RRAGBQ5VZM2 374 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 DTHD1Q6ZMT9 781 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 SULF1Q8IWU6 871 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 TEX11Q8IYF3 940 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 DISC1Q9NRI5 854 aa23.55■■□□□ 1.36
SH3D21-202ENST00000474766 FLT1P17948 1338 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 RPN1P04843 607 aaKnown RBP23.54■■□□□ 1.36
SH3D21-202ENST00000474766 PRPHP41219 470 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 CKAP4Q07065 602 aaKnown RBP23.54■■□□□ 1.36
SH3D21-202ENST00000474766 STIM1Q13586 685 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 SPDYE2Q495Y8 402 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 NAALADL2Q58DX5 795 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 ZNF662Q6ZS27 426 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 ZMYND12Q9H0C1 365 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 TMEM60Q9H2L4 133 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 SMARCA1P28370 1054 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 CDC25AP30304 524 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 STAT6P42226 847 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 INF2Q27J81 1249 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 MCTP2Q6DN12 878 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 HAUS4Q9H6D7 363 aa23.54■■□□□ 1.36
SH3D21-202ENST00000474766 ZNF70Q9UC06 446 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms