RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 RBBP6Q7Z6E9 1792 aaKnown RBP23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 GRM1Q13255 1194 aa23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 ANO1Q5XXA6 986 aa23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 TBCKQ8TEA7 893 aa23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 ZNF592Q92610 1267 aa23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 TRERF1Q96PN7 1200 aa23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 SDF4Q9BRK5 362 aa23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 POLR3EQ9NVU0 708 aa23.44■■□□□ 1.34
SMIM11A-204ENST00000474455 ZNFX1Q9P2E3 1918 aaKnown RBP23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 SLU7O95391 586 aaKnown RBP23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 SLC10A3P09131 477 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 FDX1P10109 184 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 FAM193AP78312 1265 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 ZNF174Q15697 407 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 Q3C1V9 767 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 KIAA1468Q9P260 1216 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 ARID5BQ14865 1188 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 RILPL1Q5EBL4 403 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 FILIP1Q7Z7B0 1213 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 FCHSD1Q86WN1 690 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 LINC00301Q8NCQ3 95 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 RBPJLQ9UBG7 517 aa23.43■■□□□ 1.34
SMIM11A-204ENST00000474455 USP27XA6NNY8 438 aa23.42■■□□□ 1.34
SMIM11A-204ENST00000474455 OSBPP22059 807 aa23.42■■□□□ 1.34
SMIM11A-204ENST00000474455 STAT3P40763 770 aa23.42■■□□□ 1.34
SMIM11A-204ENST00000474455 FSTL1Q12841 308 aa23.42■■□□□ 1.34
SMIM11A-204ENST00000474455 NONOQ15233 471 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMIM11A-204ENST00000474455 PTPAQ15257 358 aa23.42■■□□□ 1.34
SMIM11A-204ENST00000474455 TAF3Q5VWG9 929 aa23.42■■□□□ 1.34
SMIM11A-204ENST00000474455 ATP2A1O14983 1001 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 CCP110O43303 1012 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 STK38Q15208 465 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 CYP4F22Q6NT55 531 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 KRT25Q7Z3Z0 450 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 PURBQ96QR8 312 aaKnown RBP23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 RNF146Q9NTX7 359 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 LCTP09848 1927 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 IGF2BP3O00425 579 aaKnown RBP eCLIP23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 MARCKSP29966 332 aaPredicted RBP23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 PABPC4Q13310 644 aaKnown RBP eCLIP23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 TTC38Q5R3I4 469 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 TEX13BQ9BXU2 312 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 FAM53CQ9NYF3 392 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 COL20A1Q9P218 1284 aa23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 ZNF215Q9UL58 517 aaPredicted RBP23.41■■□□□ 1.34
SMIM11A-204ENST00000474455 OAZ1P54368 228 aa23.4■■□□□ 1.34
SMIM11A-204ENST00000474455 NLRP12P59046 1061 aa23.4■■□□□ 1.34
SMIM11A-204ENST00000474455 PAXIP1Q6ZW49 1069 aaPredicted RBP23.4■■□□□ 1.34
SMIM11A-204ENST00000474455 ANKRD23Q86SG2 305 aa23.4■■□□□ 1.34
SMIM11A-204ENST00000474455 KRT222Q8N1A0 295 aa23.4■■□□□ 1.34
SMIM11A-204ENST00000474455 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.4■■□□□ 1.34
SMIM11A-204ENST00000474455 TESPA1A2RU30 521 aaPredicted RBP23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 GCOM1H8Y6P7 765 aaPredicted RBP23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 PIK3CDO00329 1044 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 POLR2MP0CAP2 368 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 MCM7P33993 719 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 TRAF1Q13077 416 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 LETM2Q2VYF4 491 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 ANO3Q9BYT9 981 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 SPATC1LQ9H0A9 340 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 L2HGDHQ9H9P8 463 aa23.39■■□□□ 1.34
SMIM11A-204ENST00000474455 DOCK3Q8IZD9 2030 aa23.39■■□□□ 1.33
SMIM11A-204ENST00000474455 UBXN2AP68543 259 aa23.39■■□□□ 1.33
SMIM11A-204ENST00000474455 NSMFQ6X4W1 530 aa23.39■■□□□ 1.33
SMIM11A-204ENST00000474455 SLC30A10Q6XR72 485 aa23.39■■□□□ 1.33
SMIM11A-204ENST00000474455 TIGD1Q96MW7 591 aa23.39■■□□□ 1.33
SMIM11A-204ENST00000474455 SPTLC2O15270 562 aa23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 HSD17B4P51659 736 aa23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 NDUFA8P51970 172 aa23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 SLC39A14Q15043 492 aa23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 CREBRFQ8IUR6 639 aa23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 MB21D1Q8N884 522 aa23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 ZFP91Q96JP5 570 aaPredicted RBP23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 MOV10L1Q9BXT6 1211 aaKnown RBP23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 GLT8D2Q9H1C3 349 aa23.38■■□□□ 1.33
SMIM11A-204ENST00000474455 IKBKBO14920 756 aa23.37■■□□□ 1.33
SMIM11A-204ENST00000474455 RPS6P62753 249 aaKnown RBP23.37■■□□□ 1.33
SMIM11A-204ENST00000474455 HTRA3P83110 453 aa23.37■■□□□ 1.33
SMIM11A-204ENST00000474455 NEK8Q86SG6 692 aa23.37■■□□□ 1.33
SMIM11A-204ENST00000474455 SMCR8Q8TEV9 937 aaPredicted RBP23.37■■□□□ 1.33
SMIM11A-204ENST00000474455 CCNT1O60563 726 aaKnown RBP23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 CMA1P23946 247 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 GRIN1Q05586 938 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 ANKRD13CQ8N6S4 541 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 PNMA3Q9UL41 463 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 SLC45A1Q9Y2W3 748 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 A0A1B0GVL5 298 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 MANSC4A6NHS7 340 aaPredicted RBP23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 SPDYE3A6NKU9 549 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 TDP2O95551 362 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 SFPQP23246 707 aaKnown RBP eCLIP23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 BAATQ14032 418 aaPredicted RBP23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 NAA30Q147X3 362 aaPredicted RBP23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 KMT5BQ4FZB7 885 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 RIOX2Q8IUF8 465 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 CLIC6Q96NY7 704 aa23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 TRMT1Q9NXH9 659 aaKnown RBP23.36■■□□□ 1.33
SMIM11A-204ENST00000474455 TRAPPC10P48553 1259 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 PTGDRQ13258 359 aa23.35■■□□□ 1.33
SMIM11A-204ENST00000474455 AP3B2Q13367 1082 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms