RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CTAGE5O15320 804 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 PQBP1O60828 265 aaKnown RBP16.33■□□□□ 0.21
VAMP4-203ENST00000474047 GH1P01241 217 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 TLE2Q04725 743 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 FUT2Q10981 343 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 LY6KQ17RY6 165 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 C1orf53Q5VUE5 145 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 KCNV1Q6PIU1 500 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 ZNF713Q8N859 430 aaPredicted RBP16.33■□□□□ 0.21
VAMP4-203ENST00000474047 EHMT1Q9H9B1 1298 aa16.33■□□□□ 0.21
VAMP4-203ENST00000474047 MEIS2O14770 477 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 ADCY7P51828 1080 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 STK3Q13188 491 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 SNX17Q15036 470 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 UBE2SQ16763 222 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 GNPTABQ3T906 1256 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 PPP1R18Q6NYC8 613 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
VAMP4-203ENST00000474047 IL31RAQ8NI17 732 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
VAMP4-203ENST00000474047 ZFP91Q96JP5 570 aaPredicted RBP16.33■□□□□ 0.2
VAMP4-203ENST00000474047 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
VAMP4-203ENST00000474047 COLQQ9Y215 455 aaPredicted RBP16.33■□□□□ 0.2
VAMP4-203ENST00000474047 CEP290O15078 2479 aa16.33■□□□□ 0.2
VAMP4-203ENST00000474047 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 SMCO2A6NFE2 343 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 KPNA6O60684 536 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 STAM2O75886 525 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 ARIH2O95376 493 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 EVCP57679 992 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 CCDC62Q6P9F0 684 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
VAMP4-203ENST00000474047 TRIM22Q8IYM9 498 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
VAMP4-203ENST00000474047 PHKBQ93100 1093 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 BARHL2Q9NY43 387 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 KIAA1217Q5T5P2 1943 aa16.32■□□□□ 0.2
VAMP4-203ENST00000474047 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
VAMP4-203ENST00000474047 SEC24BO95487 1268 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 SCG2P13521 617 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 PFKFB3Q16875 520 aaPredicted RBP16.31■□□□□ 0.2
VAMP4-203ENST00000474047 RIC8AQ9NPQ8 531 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
VAMP4-203ENST00000474047 STXBP3O00186 592 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 ARVCFO00192 962 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
VAMP4-203ENST00000474047 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 CLTBP09497 229 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 TGFB3P10600 412 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 SSRP1Q08945 709 aaKnown RBP16.31■□□□□ 0.2
VAMP4-203ENST00000474047 ITGA7Q13683 1181 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 LAMC2Q13753 1193 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 XRRA1Q6P2D8 792 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 MTG1Q9BT17 334 aaPredicted RBP16.31■□□□□ 0.2
VAMP4-203ENST00000474047 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 PCDHA6Q9UN73 950 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 PCDHA8Q9Y5H6 950 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 NID2Q14112 1375 aa16.31■□□□□ 0.2
VAMP4-203ENST00000474047 IFNAR1P17181 557 aa16.3■□□□□ 0.2
VAMP4-203ENST00000474047 MDM2Q00987 491 aaPredicted RBP16.3■□□□□ 0.2
VAMP4-203ENST00000474047 PCNX4Q63HM2 1172 aa16.3■□□□□ 0.2
VAMP4-203ENST00000474047 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
VAMP4-203ENST00000474047 TOX2Q96NM4 488 aa16.3■□□□□ 0.2
VAMP4-203ENST00000474047 RNF26Q9BY78 433 aaPredicted RBP16.3■□□□□ 0.2
VAMP4-203ENST00000474047 SLKQ9H2G2 1235 aaPredicted RBP16.3■□□□□ 0.2
VAMP4-203ENST00000474047 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
VAMP4-203ENST00000474047 A6NJR5 290 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 SORBS3O60504 671 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 FOSP01100 380 aaPredicted RBP16.29■□□□□ 0.2
VAMP4-203ENST00000474047 MAGEA10P43363 369 aaPredicted RBP16.29■□□□□ 0.2
VAMP4-203ENST00000474047 NEK4P51957 841 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 PSMC6P62333 389 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 MRPS9P82933 396 aaKnown RBP16.29■□□□□ 0.2
VAMP4-203ENST00000474047 ARHGAP1Q07960 439 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 ANKRD33Q7Z3H0 272 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 TEX2Q8IWB9 1127 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 SEZ6LQ9BYH1 1024 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 C6orf50Q9HD87 102 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 FRMPD4Q14CM0 1322 aa16.29■□□□□ 0.2
VAMP4-203ENST00000474047 RGS20O76081 388 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 GGPS1O95749 300 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
VAMP4-203ENST00000474047 DGKDQ16760 1214 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 TYW1BQ6NUM6 668 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 UBE2OQ9C0C9 1292 aaKnown RBP16.28■□□□□ 0.2
VAMP4-203ENST00000474047 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
VAMP4-203ENST00000474047 PDLIM7Q9NR12 457 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 FIBPO43427 364 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 CDKL5O76039 1030 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 RAG1P15918 1043 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 GNA11P29992 359 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 CDK7P50613 346 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms