RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PKN1Q16512 942 aa21.79■■□□□ 1.08
PTCD3-210ENST00000473829 LY6KQ17RY6 165 aa21.79■■□□□ 1.08
PTCD3-210ENST00000473829 C1orf53Q5VUE5 145 aa21.79■■□□□ 1.08
PTCD3-210ENST00000473829 CXCL17Q6UXB2 119 aa21.79■■□□□ 1.08
PTCD3-210ENST00000473829 STARD7Q9NQZ5 370 aa21.79■■□□□ 1.08
PTCD3-210ENST00000473829 BARHL2Q9NY43 387 aa21.79■■□□□ 1.08
PTCD3-210ENST00000473829 NKRFO15226 690 aaKnown RBP eCLIP21.78■■□□□ 1.08
PTCD3-210ENST00000473829 CCND2P30279 289 aa21.78■■□□□ 1.08
PTCD3-210ENST00000473829 NAPAP54920 295 aa21.78■■□□□ 1.08
PTCD3-210ENST00000473829 MRPS9P82933 396 aaKnown RBP21.78■■□□□ 1.08
PTCD3-210ENST00000473829 STK3Q13188 491 aa21.78■■□□□ 1.08
PTCD3-210ENST00000473829 PFKFB3Q16875 520 aaPredicted RBP21.78■■□□□ 1.08
PTCD3-210ENST00000473829 PPP1R18Q6NYC8 613 aa21.78■■□□□ 1.08
PTCD3-210ENST00000473829 ZNF274Q96GC6 653 aaPredicted RBP21.78■■□□□ 1.08
PTCD3-210ENST00000473829 MYH7BA7E2Y1 1941 aa21.77■■□□□ 1.08
PTCD3-210ENST00000473829 PRPF3O43395 683 aaKnown RBP21.77■■□□□ 1.08
PTCD3-210ENST00000473829 EIF5BO60841 1220 aaKnown RBP21.77■■□□□ 1.08
PTCD3-210ENST00000473829 SCG2P13521 617 aa21.77■■□□□ 1.08
PTCD3-210ENST00000473829 IFNAR1P17181 557 aa21.77■■□□□ 1.08
PTCD3-210ENST00000473829 ARHGAP1Q07960 439 aa21.77■■□□□ 1.08
PTCD3-210ENST00000473829 GLT1D1Q96MS3 346 aa21.77■■□□□ 1.08
PTCD3-210ENST00000473829 hCG_1984214I3L0E3 225 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 AK2P54819 239 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 ZNF713Q8N859 430 aaPredicted RBP21.76■■□□□ 1.07
PTCD3-210ENST00000473829 SLC26A6Q9BXS9 759 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 ALDH8A1Q9H2A2 487 aaPredicted RBP21.76■■□□□ 1.07
PTCD3-210ENST00000473829 DOCK5Q9H7D0 1870 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 RIC8AQ9NPQ8 531 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 DDX41Q9UJV9 622 aaKnown RBP21.76■■□□□ 1.07
PTCD3-210ENST00000473829 TPCN1Q9ULQ1 816 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 MRVI1Q9Y6F6 885 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 ELP1O95163 1332 aa21.76■■□□□ 1.07
PTCD3-210ENST00000473829 ADAMTS3O15072 1205 aa21.75■■□□□ 1.07
PTCD3-210ENST00000473829 ADCY7P51828 1080 aa21.75■■□□□ 1.07
PTCD3-210ENST00000473829 TLE2Q04725 743 aa21.75■■□□□ 1.07
PTCD3-210ENST00000473829 CHRDL2Q6WN34 429 aa21.75■■□□□ 1.07
PTCD3-210ENST00000473829 RNF26Q9BY78 433 aaPredicted RBP21.75■■□□□ 1.07
PTCD3-210ENST00000473829 COLQQ9Y215 455 aaPredicted RBP21.75■■□□□ 1.07
PTCD3-210ENST00000473829 GRIN2DO15399 1336 aa21.75■■□□□ 1.07
PTCD3-210ENST00000473829 SMCO2A6NFE2 343 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 A6NJR5 290 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PQBP1O60828 265 aaKnown RBP21.74■■□□□ 1.07
PTCD3-210ENST00000473829 GH1P01241 217 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 CPT1AP50416 773 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PSMC6P62333 389 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PURAQ00577 322 aaKnown RBP21.74■■□□□ 1.07
PTCD3-210ENST00000473829 SP2Q02086 613 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 SEMA3FQ13275 785 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PCNX4Q63HM2 1172 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 SH3RF1Q7Z6J0 888 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PGBD1Q96JS3 809 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 INPP4AQ96PE3 977 aaPredicted RBP21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PRO3102Q9H379 93 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PDLIM7Q9NR12 457 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 RTEL1Q9NZ71 1219 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PCDHA6Q9UN73 950 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 PCDHA8Q9Y5H6 950 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 SCN10AQ9Y5Y9 1956 aa21.74■■□□□ 1.07
PTCD3-210ENST00000473829 A0A0U1RQG5 324 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-210ENST00000473829 ZEB2O60315 1214 aa21.73■■□□□ 1.07
PTCD3-210ENST00000473829 MYL3P08590 195 aa21.73■■□□□ 1.07
PTCD3-210ENST00000473829 UBA1P22314 1058 aaKnown RBP21.73■■□□□ 1.07
PTCD3-210ENST00000473829 CDK7P50613 346 aa21.73■■□□□ 1.07
PTCD3-210ENST00000473829 SCRN1Q12765 414 aa21.73■■□□□ 1.07
PTCD3-210ENST00000473829 AFG1LQ8WV93 481 aa21.73■■□□□ 1.07
PTCD3-210ENST00000473829 VTI1AQ96AJ9 217 aa21.73■■□□□ 1.07
PTCD3-210ENST00000473829 TMEM260Q9NX78 707 aa21.73■■□□□ 1.07
PTCD3-210ENST00000473829 RBM27Q9P2N5 1060 aaKnown RBP21.73■■□□□ 1.07
PTCD3-210ENST00000473829 SPDYE3A6NKU9 549 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 ARVCFO00192 962 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 SORBS3O60504 671 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 DTNBO60941 627 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 CABYRO75952 493 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 LARGE1O95461 756 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 CLK2P49760 499 aaKnown RBP21.72■■□□□ 1.07
PTCD3-210ENST00000473829 ANKRD33Q7Z3H0 272 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 SLC43A3Q8NBI5 491 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 KIF2CQ99661 725 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 BCAS3Q9H6U6 928 aa21.72■■□□□ 1.07
PTCD3-210ENST00000473829 PRDM5Q9NQX1 630 aaPredicted RBP21.72■■□□□ 1.07
PTCD3-210ENST00000473829 TRIM43BA6NCK2 446 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 STAM2O75886 525 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 MMP3P08254 477 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 ICAM3P32942 547 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 MAGEA10P43363 369 aaPredicted RBP21.71■■□□□ 1.07
PTCD3-210ENST00000473829 NEK4P51957 841 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 AKAP17AQ02040 695 aaKnown RBP21.71■■□□□ 1.07
PTCD3-210ENST00000473829 FAAP100Q0VG06 881 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 ITGA7Q13683 1181 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 EMID1Q96A84 441 aaPredicted RBP21.71■■□□□ 1.07
PTCD3-210ENST00000473829 TRIM43Q96BQ3 446 aaPredicted RBP21.71■■□□□ 1.07
PTCD3-210ENST00000473829 GDF15Q99988 308 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 ZMYND12Q9H0C1 365 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 POLR3EQ9NVU0 708 aa21.71■■□□□ 1.07
PTCD3-210ENST00000473829 ESYT2A0FGR8 921 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 CPLX1O14810 134 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 PFKFB2O60825 505 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 GGPS1O95749 300 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 CLTBP09497 229 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 GNPTABQ3T906 1256 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms