RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 SUGP1Q8IWZ8 645 aaKnown RBP15.76■□□□□ 0.11
NHLRC3-204ENST00000473371 IFT81Q8WYA0 676 aa15.76■□□□□ 0.11
NHLRC3-204ENST00000473371 STX8Q9UNK0 236 aa15.76■□□□□ 0.11
NHLRC3-204ENST00000473371 SLC1A4P43007 532 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 DYMQ7RTS9 669 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 KAT2BQ92831 832 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 TSKSQ9UJT2 592 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 NFU1Q9UMS0 254 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 ZEB2O60315 1214 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 KRT14P02533 472 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 HIBADHP31937 336 aaKnown RBP15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 CARSP49589 748 aaKnown RBP15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 BAP1Q92560 729 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 CELF1Q92879 486 aaKnown RBP15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 MMTAG2Q9BU76 263 aaKnown RBP15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 CPVLQ9H3G5 476 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 EPB41L5Q9HCM4 733 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 TAF1P21675 1872 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 SMCO2A6NFE2 343 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 HEXIM1O94992 359 aaKnown RBP15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 TXKP42681 527 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 PAK2Q13177 524 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 C12orf60Q5U649 245 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 B4GALNT4Q76KP1 1039 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 RNF10Q8N5U6 811 aaKnown RBP15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 C6orf50Q9HD87 102 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 ZNF652Q9Y2D9 606 aa15.75■□□□□ 0.11
NHLRC3-204ENST00000473371 MYMKA6NI61 221 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 GLI1P08151 1106 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 GUCY2DQ02846 1103 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 TMED8Q6PL24 325 aaPredicted RBP15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 UNC13DQ70J99 1090 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 DZIP1Q86YF9 867 aaKnown RBP15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 ZNF444Q8N0Y2 327 aaPredicted RBP15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 ZMYND12Q9H0C1 365 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 NLRC4Q9NPP4 1024 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 SCN7AQ01118 1682 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 ESYT3A0FGR9 886 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 KLRF2D3W0D1 207 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 TMC4Q7Z404 712 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 RNF14Q9UBS8 474 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 LAMB2P55268 1798 aa15.74■□□□□ 0.11
NHLRC3-204ENST00000473371 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 KIAA0754O94854 1291 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 FAM153BP0C7A2 387 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 FAM153CQ494X1 144 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 SOGA3Q5TF21 947 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 FBXW10Q5XX13 1052 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 MCTP2Q6DN12 878 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 GUF1Q8N442 669 aaKnown RBP15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 TMEM47Q9BQJ4 181 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 YY1AP1Q9H869 796 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 GDF3Q9NR23 364 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 FAM153AQ9UHL3 310 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 ABCB11O95342 1321 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 SSU72P8A0A1W2PR75 194 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 GNA11P29992 359 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 GUCY2FP51841 1108 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 APBA1Q02410 837 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 GRB10Q13322 594 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 ASTE1Q2TB18 679 aaPredicted RBP15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 TBCKQ8TEA7 893 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 TSG101Q99816 390 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 LZTS2Q9BRK4 669 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 POLD4Q9HCU8 107 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 PVALEFA0A1B0GWK0 134 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 ZSCAN5CA6NGD5 496 aaPredicted RBP15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 ZPR1O75312 459 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 LRRC63Q05C16 580 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 SLC9C1Q4G0N8 1177 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 BLOC1S4Q9NUP1 217 aa15.73■□□□□ 0.11
NHLRC3-204ENST00000473371 IQCKQ8N0W5 287 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 OTUD6BQ8N6M0 293 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 RNPC3Q96LT9 517 aaKnown RBP15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 KRT12Q99456 494 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 EDEM3Q9BZQ6 932 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 LUC7LQ9NQ29 371 aaKnown RBP15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 LOC102724428A0A0B4J2F2 783 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 PALMO75781 387 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 FTCDO95954 541 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 HNRNPH1P31943 449 aaKnown RBP15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 SIK1P57059 783 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 ITPK1Q13572 414 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 LRRC41Q15345 812 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 HGSNATQ68CP4 663 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 KDM7AQ6ZMT4 941 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 SLC44A5Q8NCS7 719 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 ACSBG1Q96GR2 724 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 BIN2Q9UBW5 565 aaPredicted RBP15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 STK17AQ9UEE5 414 aa15.72■□□□□ 0.11
NHLRC3-204ENST00000473371 CAPN7Q9Y6W3 813 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms