RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 NSUN3Q9H649 340 aaKnown RBP16.42■□□□□ 0.22
SMURF1-203ENST00000472627 GTF2IRD1Q9UHL9 959 aa16.42■□□□□ 0.22
SMURF1-203ENST00000472627 LCTP09848 1927 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 M0R2C6 588 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 ST18O60284 1047 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
SMURF1-203ENST00000472627 SLC16A2P36021 539 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 PTPN5P54829 565 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 HFE2Q6ZVN8 426 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 YME1L1Q96TA2 773 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 PTPRSQ13332 1948 aa16.41■□□□□ 0.22
SMURF1-203ENST00000472627 C19orf67A6NJJ6 358 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 GPM6BQ13491 265 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 GPNMBQ14956 572 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 EPC2Q52LR7 807 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 DHX38Q92620 1227 aaKnown RBP16.4■□□□□ 0.22
SMURF1-203ENST00000472627 MAF1Q9H063 256 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 CLDND1Q9NY35 253 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 WDR19Q8NEZ3 1342 aa16.4■□□□□ 0.22
SMURF1-203ENST00000472627 TRIP12Q14669 1992 aaPredicted RBP16.39■□□□□ 0.21
SMURF1-203ENST00000472627 H3BNC9 293 aa16.39■□□□□ 0.21
SMURF1-203ENST00000472627 TOP1P11387 765 aaKnown RBP16.39■□□□□ 0.21
SMURF1-203ENST00000472627 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
SMURF1-203ENST00000472627 TCEAL5Q5H9L2 206 aa16.39■□□□□ 0.21
SMURF1-203ENST00000472627 CHST3Q7LGC8 479 aa16.39■□□□□ 0.21
SMURF1-203ENST00000472627 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
SMURF1-203ENST00000472627 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
SMURF1-203ENST00000472627 CLEC4DQ8WXI8 215 aa16.39■□□□□ 0.21
SMURF1-203ENST00000472627 CTAGE1Q96RT6 745 aa16.39■□□□□ 0.21
SMURF1-203ENST00000472627 PSEN2P49810 448 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 MFSD10Q14728 455 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 SEPT14Q6ZU15 432 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 SUGP1Q8IWZ8 645 aaKnown RBP16.38■□□□□ 0.21
SMURF1-203ENST00000472627 RGS22Q8NE09 1264 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 GPCPD1Q9NPB8 672 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 IL17RBQ9NRM6 502 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 HDAC6Q9UBN7 1215 aa16.38■□□□□ 0.21
SMURF1-203ENST00000472627 NMT2O60551 498 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 ARIH2O95376 493 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 IRS1P35568 1242 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 FOXK2Q01167 660 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 ARHGAP1Q07960 439 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 COL19A1Q14993 1142 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 STXBP2Q15833 593 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 KIAA0753Q2KHM9 967 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 HERC4Q5GLZ8 1057 aaPredicted RBP16.37■□□□□ 0.21
SMURF1-203ENST00000472627 ZNF618Q5T7W0 954 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 CCDC62Q6P9F0 684 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMURF1-203ENST00000472627 RASGRP2Q7LDG7 609 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 TMEM192Q8IY95 271 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 NSUN6Q8TEA1 469 aaKnown RBP16.37■□□□□ 0.21
SMURF1-203ENST00000472627 SEPT8Q92599 483 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 KAT2BQ92831 832 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
SMURF1-203ENST00000472627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMURF1-203ENST00000472627 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
SMURF1-203ENST00000472627 RSPH10B2B2RC85 870 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
SMURF1-203ENST00000472627 F2P00734 622 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 RSPH10BP0C881 870 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 THPOP40225 353 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 LAMC2Q13753 1193 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 SMAD2Q15796 467 aaKnown RBP16.36■□□□□ 0.21
SMURF1-203ENST00000472627 LY6KQ17RY6 165 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 RPAINQ86UA6 219 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 DBF4BQ8NFT6 615 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 EMID1Q96A84 441 aaPredicted RBP16.36■□□□□ 0.21
SMURF1-203ENST00000472627 IWS1Q96ST2 819 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 FSD1Q9BTV5 496 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 LMAN2LQ9H0V9 348 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 IRF2BPLQ9H1B7 796 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 MUTYHQ9UIF7 546 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 RWDD3Q9Y3V2 267 aa16.36■□□□□ 0.21
SMURF1-203ENST00000472627 NOVP48745 357 aa16.35■□□□□ 0.21
SMURF1-203ENST00000472627 MCF2L2Q86YR7 1114 aa16.35■□□□□ 0.21
SMURF1-203ENST00000472627 PPTC7Q8NI37 304 aa16.35■□□□□ 0.21
SMURF1-203ENST00000472627 PPP2R3CQ969Q6 453 aa16.35■□□□□ 0.21
SMURF1-203ENST00000472627 C11orf84Q9BUA3 381 aaPredicted RBP16.35■□□□□ 0.21
SMURF1-203ENST00000472627 MRVI1Q9Y6F6 885 aa16.35■□□□□ 0.21
SMURF1-203ENST00000472627 ORC4O43929 436 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 RB1P06400 928 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 CTDSPL2Q05D32 466 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 SMAD4Q13485 552 aaKnown RBP16.34■□□□□ 0.21
SMURF1-203ENST00000472627 TCTN1Q2MV58 587 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 TRIM71Q2Q1W2 868 aaKnown RBP16.34■□□□□ 0.21
SMURF1-203ENST00000472627 USH1GQ495M9 461 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 PLEKHG4Q58EX7 1191 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 BMP8AQ7Z5Y6 402 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 RNF135Q8IUD6 432 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 EDAQ92838 391 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 PBXIP1Q96AQ6 731 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 TMEM47Q9BQJ4 181 aa16.34■□□□□ 0.21
SMURF1-203ENST00000472627 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
SMURF1-203ENST00000472627 ZNF318Q5VUA4 2279 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms