RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 GPATCH3Q96I76 525 aa22.41■■□□□ 1.18
SORT1-203ENST00000471996 HDAC6Q9UBN7 1215 aa22.41■■□□□ 1.18
SORT1-203ENST00000471996 FAM50BQ9Y247 325 aa22.41■■□□□ 1.18
SORT1-203ENST00000471996 C19orf67A6NJJ6 358 aa22.4■■□□□ 1.18
SORT1-203ENST00000471996 GH1P01241 217 aa22.4■■□□□ 1.18
SORT1-203ENST00000471996 CASTP20810 708 aaKnown RBP22.4■■□□□ 1.18
SORT1-203ENST00000471996 HTRA4P83105 476 aaPredicted RBP22.4■■□□□ 1.18
SORT1-203ENST00000471996 ARHGAP1Q07960 439 aa22.4■■□□□ 1.18
SORT1-203ENST00000471996 TIGD5Q53EQ6 642 aa22.4■■□□□ 1.18
SORT1-203ENST00000471996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.4■■□□□ 1.184e-12■■■■■ 29.3
SORT1-203ENST00000471996 BANK1Q8NDB2 785 aa22.4■■□□□ 1.18
SORT1-203ENST00000471996 SP7Q8TDD2 431 aaPredicted RBP22.4■■□□□ 1.18
SORT1-203ENST00000471996 PABPC5Q96DU9 382 aaKnown RBP22.4■■□□□ 1.18
SORT1-203ENST00000471996 GPCPD1Q9NPB8 672 aa22.4■■□□□ 1.18
SORT1-203ENST00000471996 WDFY4Q6ZS81 3184 aa22.4■■□□□ 1.18
SORT1-203ENST00000471996 TRIP12Q14669 1992 aaPredicted RBP22.39■■□□□ 1.18
SORT1-203ENST00000471996 FRMPD2Q68DX3 1309 aaPredicted RBP22.39■■□□□ 1.18
SORT1-203ENST00000471996 SIP14410 1827 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 RANBP6O60518 1105 aaKnown RBP22.39■■□□□ 1.17
SORT1-203ENST00000471996 CTDSPL2Q05D32 466 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 PTK7Q13308 1070 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 MBTPS1Q14703 1052 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 COL19A1Q14993 1142 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 TRIM71Q2Q1W2 868 aaKnown RBP22.39■■□□□ 1.17
SORT1-203ENST00000471996 EPC2Q52LR7 807 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 HFE2Q6ZVN8 426 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 C7orf31Q8N865 590 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 SAMD11Q96NU1 681 aa22.39■■□□□ 1.17
SORT1-203ENST00000471996 CHMP4BQ9H444 224 aaKnown RBP22.39■■□□□ 1.17
SORT1-203ENST00000471996 WDR19Q8NEZ3 1342 aa22.38■■□□□ 1.17
SORT1-203ENST00000471996 LGR5O75473 907 aa22.38■■□□□ 1.17
SORT1-203ENST00000471996 DGKDQ16760 1214 aa22.38■■□□□ 1.17
SORT1-203ENST00000471996 LY6KQ17RY6 165 aa22.38■■□□□ 1.17
SORT1-203ENST00000471996 ZNF618Q5T7W0 954 aa22.38■■□□□ 1.17
SORT1-203ENST00000471996 ADHFE1Q8IWW8 467 aa22.38■■□□□ 1.17
SORT1-203ENST00000471996 RBAK-RBAKDNI3L0D1 243 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 AMHP03971 560 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 TOP1P11387 765 aaKnown RBP22.37■■□□□ 1.17
SORT1-203ENST00000471996 MKRN4PQ13434 485 aaPredicted RBP22.37■■□□□ 1.17
SORT1-203ENST00000471996 TCEAL5Q5H9L2 206 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 ZMYM1Q5SVZ6 1142 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 CHST3Q7LGC8 479 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 RGS22Q8NE09 1264 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 WNT8BQ93098 351 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 MFSD14AQ96MC6 490 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 TMEM47Q9BQJ4 181 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 KATNAL1Q9BW62 490 aa22.37■■□□□ 1.17
SORT1-203ENST00000471996 UPF3BQ9BZI7 483 aaKnown RBP22.37■■□□□ 1.17
SORT1-203ENST00000471996 H3BNC9 293 aa22.36■■□□□ 1.17
SORT1-203ENST00000471996 PSEN2P49810 448 aa22.36■■□□□ 1.17
SORT1-203ENST00000471996 SEPT14Q6ZU15 432 aa22.36■■□□□ 1.17
SORT1-203ENST00000471996 MYOCDQ8IZQ8 938 aa22.36■■□□□ 1.17
SORT1-203ENST00000471996 ANKS1AQ92625 1134 aa22.36■■□□□ 1.17
SORT1-203ENST00000471996 ALG1Q9BT22 464 aa22.36■■□□□ 1.17
SORT1-203ENST00000471996 ANAPC4Q9UJX5 808 aa22.36■■□□□ 1.17
SORT1-203ENST00000471996 FOXP2O15409 715 aa22.35■■□□□ 1.17
SORT1-203ENST00000471996 ORC4O43929 436 aa22.35■■□□□ 1.17
SORT1-203ENST00000471996 PDHBP11177 359 aa22.35■■□□□ 1.17
SORT1-203ENST00000471996 IRS1P35568 1242 aa22.35■■□□□ 1.17
SORT1-203ENST00000471996 HNRNPUQ00839 825 aaKnown RBP eCLIP22.35■■□□□ 1.17
SORT1-203ENST00000471996 GPM6BQ13491 265 aa22.35■■□□□ 1.17
SORT1-203ENST00000471996 EP400NLQ6ZTU2 488 aa22.35■■□□□ 1.17
SORT1-203ENST00000471996 DBF4BQ8NFT6 615 aa22.35■■□□□ 1.17
SORT1-203ENST00000471996 NSUN3Q9H649 340 aaKnown RBP22.35■■□□□ 1.17
SORT1-203ENST00000471996 EMSYQ7Z589 1322 aa22.34■■□□□ 1.17
SORT1-203ENST00000471996 HAS3O00219 553 aa22.34■■□□□ 1.17
SORT1-203ENST00000471996 F2P00734 622 aa22.34■■□□□ 1.17
SORT1-203ENST00000471996 FGRP09769 529 aa22.34■■□□□ 1.17
SORT1-203ENST00000471996 MFSD10Q14728 455 aa22.34■■□□□ 1.17
SORT1-203ENST00000471996 KIAA0753Q2KHM9 967 aa22.34■■□□□ 1.17
SORT1-203ENST00000471996 EMID1Q96A84 441 aaPredicted RBP22.34■■□□□ 1.17
SORT1-203ENST00000471996 ZNF200P98182 395 aaPredicted RBP22.33■■□□□ 1.17
SORT1-203ENST00000471996 TMEM192Q8IY95 271 aa22.33■■□□□ 1.17
SORT1-203ENST00000471996 MAF1Q9H063 256 aa22.33■■□□□ 1.17
SORT1-203ENST00000471996 TCP11L1Q9NUJ3 509 aa22.33■■□□□ 1.17
SORT1-203ENST00000471996 CLDND1Q9NY35 253 aa22.33■■□□□ 1.17
SORT1-203ENST00000471996 DDX41Q9UJV9 622 aaKnown RBP22.33■■□□□ 1.17
SORT1-203ENST00000471996 LTBRP36941 435 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 ZNF543Q08ER8 600 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 STXBP2Q15833 593 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 PLEKHG4Q58EX7 1191 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 HERC4Q5GLZ8 1057 aaPredicted RBP22.32■■□□□ 1.16
SORT1-203ENST00000471996 NSUN6Q8TEA1 469 aaKnown RBP22.32■■□□□ 1.16
SORT1-203ENST00000471996 TAAR1Q96RJ0 339 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 YME1L1Q96TA2 773 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 PHOX2BQ99453 314 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 FSD1Q9BTV5 496 aa22.32■■□□□ 1.16
SORT1-203ENST00000471996 RSPH10B2B2RC85 870 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 NCK2O43639 380 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 RSPH10BP0C881 870 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 ZNF286BP0CG31 522 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 SMAD2Q15796 467 aaKnown RBP22.31■■□□□ 1.16
SORT1-203ENST00000471996 USH1GQ495M9 461 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 FBXO11Q86XK2 927 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 PPTC7Q8NI37 304 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 SYTL5Q8TDW5 730 aaPredicted RBP22.31■■□□□ 1.16
SORT1-203ENST00000471996 TBC1D5Q92609 795 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 TOP1MTQ969P6 601 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 IWS1Q96ST2 819 aa22.31■■□□□ 1.16
SORT1-203ENST00000471996 SNHG28P0DPA3 235 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms