RNA–Protein interactions for RNA: ENST00000471991.5

SFPQ-207, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 440 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-207ENST00000471991 SYNE3Q6ZMZ3 975 aa16.14■□□□□ 0.17
SFPQ-207ENST00000471991 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
SFPQ-207ENST00000471991 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
SFPQ-207ENST00000471991 RASEFQ8IZ41 740 aa16.14■□□□□ 0.17
SFPQ-207ENST00000471991 CMTR1Q8N1G2 835 aaKnown RBP16.14■□□□□ 0.17
SFPQ-207ENST00000471991 TMEM199Q8N511 208 aa16.14■□□□□ 0.17
SFPQ-207ENST00000471991 SRBD1Q8N5C6 995 aaKnown RBP16.14■□□□□ 0.17
SFPQ-207ENST00000471991 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
SFPQ-207ENST00000471991 ALDH8A1Q9H2A2 487 aaPredicted RBP16.14■□□□□ 0.17
SFPQ-207ENST00000471991 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
SFPQ-207ENST00000471991 FRMPD4Q14CM0 1322 aa16.14■□□□□ 0.17
SFPQ-207ENST00000471991 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
SFPQ-207ENST00000471991 KCNV1Q6PIU1 500 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 APOA5Q6Q788 366 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 TMTC3Q6ZXV5 915 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 DEFB123Q8N688 67 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 FANCBQ8NB91 859 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 AFG1LQ8WV93 481 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 TCEANC2Q96MN5 208 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 TRPV6Q9H1D0 765 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 HIPK3Q9H422 1215 aa16.13■□□□□ 0.17
SFPQ-207ENST00000471991 RGS20O76081 388 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 HMGB1P09429 215 aaKnown RBP16.12■□□□□ 0.17
SFPQ-207ENST00000471991 CSF2RAP15509 400 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 CYP2C18P33260 490 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 NBPF20Q3BBV1 942 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 FAM47CQ5HY64 1035 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 Q7L0L9 218 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 CUL5Q93034 780 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 EMID1Q96A84 441 aaPredicted RBP16.12■□□□□ 0.17
SFPQ-207ENST00000471991 RBM28Q9NW13 759 aaKnown RBP16.12■□□□□ 0.17
SFPQ-207ENST00000471991 GBF1Q92538 1859 aa16.12■□□□□ 0.17
SFPQ-207ENST00000471991 SCN5AQ14524 2016 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 PIK3CDO00329 1044 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 SUPT20HL2P0C7V6 817 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 HSPA4P34932 840 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 PTPN11Q06124 597 aaPredicted RBP16.11■□□□□ 0.17
SFPQ-207ENST00000471991 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 NFRKBQ6P4R8 1299 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 PSRC1Q6PGN9 363 aaPredicted RBP16.11■□□□□ 0.17
SFPQ-207ENST00000471991 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
SFPQ-207ENST00000471991 CCDC82Q8N4S0 544 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.175e-26■■□□□ 13.5
SFPQ-207ENST00000471991 NOC4LQ9BVI4 516 aaKnown RBP16.11■□□□□ 0.17
SFPQ-207ENST00000471991 TRMT13Q9NUP7 481 aaKnown RBP16.11■□□□□ 0.17
SFPQ-207ENST00000471991 UMODL1Q5DID0 1318 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 CNTNAP5Q8WYK1 1306 aa16.11■□□□□ 0.17
SFPQ-207ENST00000471991 ZBTB43O43298 467 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 STAM2O75886 525 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 REC8O95072 547 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
SFPQ-207ENST00000471991 SMAD3P84022 425 aaKnown RBP16.1■□□□□ 0.17
SFPQ-207ENST00000471991 DGKDQ16760 1214 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 GNPTABQ3T906 1256 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 USP17L6PQ6QN14 398 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 PPTC7Q8NI37 304 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 KCNB2Q92953 911 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
SFPQ-207ENST00000471991 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
SFPQ-207ENST00000471991 KLF18A0A0U1RQI7 1052 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 MEIS2O14770 477 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 GGPS1O95749 300 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 TGFB3P10600 412 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 UBA1P22314 1058 aaKnown RBP16.09■□□□□ 0.17
SFPQ-207ENST00000471991 CCL23P55773 120 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 CHMP4BP1P59074 171 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 FGD1P98174 961 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 RTN1Q16799 776 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 ZNF697Q5TEC3 545 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 FAM109BQ6ICB4 259 aaPredicted RBP16.09■□□□□ 0.17
SFPQ-207ENST00000471991 PPP1R13LQ8WUF5 828 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 JAKMIP1Q96N16 626 aaKnown RBP16.09■□□□□ 0.17
SFPQ-207ENST00000471991 KATNAL1Q9BW62 490 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 WNT8AQ9H1J5 351 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 IL23AQ9NPF7 189 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 SNX14Q9Y5W7 946 aa16.09■□□□□ 0.17
SFPQ-207ENST00000471991 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
SFPQ-207ENST00000471991 GOLGA8AA7E2F4 631 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 GOLGA8BA8MQT2 603 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 ACRP10323 421 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 CYP2C9P11712 490 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 RCAN1P53805 252 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 MRPS9P82933 396 aaKnown RBP16.08■□□□□ 0.16
SFPQ-207ENST00000471991 CELF3Q5SZQ8 465 aaKnown RBP16.08■□□□□ 0.16
SFPQ-207ENST00000471991 MYSM1Q5VVJ2 828 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 PCNX4Q63HM2 1172 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 C16orf59Q7L2K0 433 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 HEATR3Q7Z4Q2 680 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 KAT2BQ92831 832 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 GPKOWQ92917 476 aaPredicted RBP eCLIP16.08■□□□□ 0.16
SFPQ-207ENST00000471991 INPP4AQ96PE3 977 aaPredicted RBP16.08■□□□□ 0.16
SFPQ-207ENST00000471991 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 MTMR10Q9NXD2 777 aa16.08■□□□□ 0.16
SFPQ-207ENST00000471991 NOD1Q9Y239 953 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms