RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 WDR24Q96S15 920 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 GMLQ99445 158 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 AMNQ9BXJ7 453 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 HERC5Q9UII4 1024 aaKnown RBP20.78■□□□□ 0.92
COL20A1-205ENST00000471582 BCS1LQ9Y276 419 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 URI1O94763 535 aaPredicted RBP20.77■□□□□ 0.92
COL20A1-205ENST00000471582 NDUFB10O96000 172 aa20.77■□□□□ 0.92
COL20A1-205ENST00000471582 EHHADHQ08426 723 aa20.77■□□□□ 0.92
COL20A1-205ENST00000471582 RBM26Q5T8P6 1007 aaKnown RBP20.77■□□□□ 0.92
COL20A1-205ENST00000471582 TEX2Q8IWB9 1127 aa20.77■□□□□ 0.92
COL20A1-205ENST00000471582 ZNF397Q8NF99 534 aaPredicted RBP20.77■□□□□ 0.92
COL20A1-205ENST00000471582 KIFC2Q96AC6 838 aa20.77■□□□□ 0.92
COL20A1-205ENST00000471582 DNAJC7Q99615 494 aa20.77■□□□□ 0.92
COL20A1-205ENST00000471582 ANO3Q9BYT9 981 aa20.77■□□□□ 0.92
COL20A1-205ENST00000471582 KCNMB3Q9NPA1 279 aa20.77■□□□□ 0.92
COL20A1-205ENST00000471582 ABCB11O95342 1321 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L15C9J2P7 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L13C9JLJ4 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L11C9JVI0 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L18D6R9N7 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L22D6RA61 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L17D6RBQ6 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L19D6RCP7 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L20D6RJB6 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 RAD21O60216 631 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 MARCH6O60337 910 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 GDF11O95390 407 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 ERVK-24P63145 666 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L24Q0WX57 530 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 ELF2Q15723 593 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 USP17L6PQ6QN14 398 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 BTNL9Q6UXG8 535 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 AGBL3Q8NEM8 1001 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 CRYGNQ8WXF5 182 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 CNOT6LQ96LI5 555 aaKnown RBP20.76■□□□□ 0.91
COL20A1-205ENST00000471582 NUDT12Q9BQG2 462 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 SPON1Q9HCB6 807 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 CAPN11Q9UMQ6 739 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 LTBP3Q9NS15 1303 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 RNF225M0QZC1 329 aaPredicted RBP20.76■□□□□ 0.91
COL20A1-205ENST00000471582 NFKBIEO00221 500 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 MEIS2O14770 477 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 MAP3K9P80192 1104 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 SLFN12Q8IYM2 578 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 OR8K1Q8NGG5 319 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 IQCDQ96DY2 449 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 FEZ1Q99689 392 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 NUP58Q9BVL2 599 aa20.76■□□□□ 0.91
COL20A1-205ENST00000471582 FOSP01100 380 aaPredicted RBP20.75■□□□□ 0.91
COL20A1-205ENST00000471582 MMP14P50281 582 aa20.75■□□□□ 0.91
COL20A1-205ENST00000471582 LRRC63Q05C16 580 aa20.75■□□□□ 0.91
COL20A1-205ENST00000471582 SYDE2Q5VT97 1194 aa20.75■□□□□ 0.91
COL20A1-205ENST00000471582 DDX12PQ92771 950 aa20.75■□□□□ 0.91
COL20A1-205ENST00000471582 CSRNP1Q96S65 589 aa20.75■□□□□ 0.91
COL20A1-205ENST00000471582 SEMA6BQ9H3T3 888 aa20.75■□□□□ 0.91
COL20A1-205ENST00000471582 SLC39A2Q9NP94 309 aa20.75■□□□□ 0.91
COL20A1-205ENST00000471582 LUC7L2Q9Y383 392 aaKnown RBP20.75■□□□□ 0.91
COL20A1-205ENST00000471582 TTC26A0AVF1 554 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 KIF5CO60282 957 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 FGFR1OPO95684 399 aaKnown RBP20.74■□□□□ 0.91
COL20A1-205ENST00000471582 GH2P01242 217 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 BMP3P12645 472 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 GLIPR1L2Q4G1C9 344 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 KCNK18Q7Z418 384 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 FBXO11Q86XK2 927 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 JDP2Q8WYK2 163 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL20A1-205ENST00000471582 V9GYY5 206 aaPredicted RBP20.74■□□□□ 0.91
COL20A1-205ENST00000471582 B4DLN1 442 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 TBX3O15119 743 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 FIGNQ5HY92 759 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 MNS1Q8NEH6 495 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 TTYH3Q9C0H2 523 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 MRFAP1Q9Y605 127 aa20.74■□□□□ 0.91
COL20A1-205ENST00000471582 EFCAB8A8MWE9 144 aa20.73■□□□□ 0.91
COL20A1-205ENST00000471582 MTIF2P46199 727 aaKnown RBP20.73■□□□□ 0.91
COL20A1-205ENST00000471582 DYMQ7RTS9 669 aa20.73■□□□□ 0.91
COL20A1-205ENST00000471582 NLGN2Q8NFZ4 835 aa20.73■□□□□ 0.91
COL20A1-205ENST00000471582 ERGIC2Q96RQ1 377 aa20.73■□□□□ 0.91
COL20A1-205ENST00000471582 ZBTB12Q9Y330 459 aaPredicted RBP20.73■□□□□ 0.91
COL20A1-205ENST00000471582 PES1O00541 588 aaKnown RBP20.72■□□□□ 0.91
COL20A1-205ENST00000471582 ARHGAP4P98171 946 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 TRAF1Q13077 416 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 ECM1Q16610 540 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 MIIPQ5JXC2 388 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 HPS3Q969F9 1004 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 DNAJC19Q96DA6 116 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 LZTFL1Q9NQ48 299 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 BMP2KQ9NSY1 1161 aaPredicted RBP20.72■□□□□ 0.91
COL20A1-205ENST00000471582 MYO1AQ9UBC5 1043 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 ZNF70Q9UC06 446 aaPredicted RBP20.72■□□□□ 0.91
COL20A1-205ENST00000471582 TCP10L2B9ZVM9 353 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 TADA3O75528 432 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 JAG1P78504 1218 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 TBC1D8BQ0IIM8 1120 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 MEA1Q16626 185 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 ERCC6LQ2NKX8 1250 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 TSR1Q2NL82 804 aaKnown RBP20.72■□□□□ 0.91
COL20A1-205ENST00000471582 Q4G0T1 1027 aa20.72■□□□□ 0.91
COL20A1-205ENST00000471582 ARHGAP29Q52LW3 1261 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms